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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121230393   pentatricopeptide repeat-containing protein At1g64580 
 ghi-r.1   107888951   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ghi-r.1   107894420   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107901382   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   100853063   pentatricopeptide repeat-containing protein At1g63330 
 osa-u.5   9271712   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 

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Top 50 coexpressed genes to 121230393 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121230393 (ghi-r.1 coexpression data)

CoexMap"121230393"


ghiLOC121230393 | Entrez gene ID : 121230393    
Species ghi vvi osa bdi bna ppo sbi gma cit hvu sot sly nta tae zma cre mtr ath bra
Paralog 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040970971.1 [sequence] [blastp]
XP_040970972.1 [sequence] [blastp]
XP_040970973.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  nucl 2,  cyto_mito 1  (predict for XP_040970971.1)
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040970972.1)
chlo 5,  nucl 2,  cyto 1,  nucl_plas 1  (predict for XP_040970973.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_040970971.1)
other 8  (predict for XP_040970972.1)
mito 4  (predict for XP_040970973.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121230393
ghi-r.1
for
107888951
ghi-r.1
for
107894420
ghi-r.1
for
107901382
vvi-u.5
for
100853063
osa-u.5
for
9271712


Ortholog ID: 17717
Species ghi ghi ghi vvi osa
Symbol LOC121230393 LOC107888951 LOC121209732 LOC100853063 LOC9271712
Function* pentatricopeptide repeat-containing protein At1g64580 pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At3g04760, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121230393 107888951 121209732 100853063 9271712
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