ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	121230824	60S ribosomal protein L28-1
ath-u.5	AT2G19730	Ribosomal L28e protein family
ath-u.5	AT4G29410	Ribosomal L28e protein family
gma-u.5	100500189	uncharacterized LOC100500189
gma-u.5	100499963	60S ribosomal protein L28-2
gma-u.5	100499921	uncharacterized LOC100499921
vvi-u.5	100245594	60S ribosomal protein L28-1
vvi-u.5	100261817	large ribosomal subunit protein eL28y
ppo-u.5	7470595	60S ribosomal protein L28-1
ppo-u.5	112326793	60S ribosomal protein L28-1
mtr-u.5	25500391	60S ribosomal protein L28-2
mtr-u.5	11433435	60S ribosomal protein L28-2
sly-u.5	101261128	large ribosomal subunit protein eL28z
sly-u.5	101247801	large ribosomal subunit protein eL28z
sly-u.5	101250778	large ribosomal subunit protein eL28z
osa-u.5	4327674	60S ribosomal protein L28-1
osa-u.5	4331176	large ribosomal subunit protein eL28z
osa-u.5	4339475	large ribosomal subunit protein eL28z
zma-u.5	100281129	60S ribosomal protein L28-like
zma-u.5	100284901	60S ribosomal protein L28-like

Annotation

functional annotation

KEGG

ghi03010 [list] [network] Ribosome (2429 genes)

GO BP

GO:0006412 [list] [network] translation

(1487 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(467 genes)	IEA
GO:0005840 [list] [network] ribosome	(1110 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(1075 genes)

IEA

Protein

XP_040972229.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 3, chlo_mito 3

(predict for XP_040972229.1)

Subcellular
localization
TargetP

other 6

(predict for XP_040972229.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121230824	ath-u.5 for AT2G19730	ath-u.5 for AT4G29410	gma-u.5 for 100500189	gma-u.5 for 100499963	gma-u.5 for 100499921	vvi-u.5 for 100245594	vvi-u.5 for 100261817	ppo-u.5 for 7470595	ppo-u.5 for 112326793	mtr-u.5 for 25500391	mtr-u.5 for 11433435	sly-u.5 for 101261128	sly-u.5 for 101247801	sly-u.5 for 101250778	osa-u.5 for 4327674	osa-u.5 for 4331176	osa-u.5 for 4339475	zma-u.5 for 100281129	zma-u.5 for 100284901

Ortholog

Ortholog ID: 1451

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

60S ribosomal protein L28-1

Ribosomal L28e protein family

60S ribosomal protein L28-1

60S ribosomal protein L28-2

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

uncharacterized LOC100499921

uncharacterized LOC100500189

60S ribosomal protein L28-1

large ribosomal subunit protein eL28y

60S ribosomal protein L28-1

60S ribosomal protein L28-2

large ribosomal subunit protein eL28z

uncharacterized LOC102577710

60S ribosomal protein L28-1-like

large ribosomal subunit protein eL28z-like

large ribosomal subunit protein eL28z

60S ribosomal protein L28-like

60S ribosomal protein L28-1

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

60S ribosomal protein L28-1-like

60S ribosomal protein L28-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	16
mtr04120	Ubiquitin mediated proteolysis	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	18
bdi00300	Lysine biosynthesis	3
bdi01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

107899912

107937288

816492

829062

103837974

103853598

106376198

106376199

102612866

100499921

100500189

100245594

100261817

7470595

112326793

11433435

25500391

101247801

101261128

102577710

102583234

142182180

142182182

4339475

4331176

100281129

100284901

123061763

123444228

8059160

110430020

100823569

100839094

5726938

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 121230824 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121230824 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	2	2	2	3	3	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121230824 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121230824 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**