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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121232161   chloroplast envelope quinone oxidoreductase homolog 
 ghi-r.1   121219405   chloroplast envelope quinone oxidoreductase homolog 
 ghi-r.1   107943452   chloroplast envelope quinone oxidoreductase homolog 
 ghi-r.1   107954963   chloroplast envelope quinone oxidoreductase homolog 
 ath-u.5   AT4G13010   Oxidoreductase, zinc-binding dehydrogenase family protein 
 bra-r.6   103859168   chloroplast envelope quinone oxidoreductase homolog 
 bna-r.1   111198735   chloroplast envelope quinone oxidoreductase homolog 
 bna-r.1   106347803   chloroplast envelope quinone oxidoreductase homolog 
 cit-r.1   102609111   chloroplast envelope quinone oxidoreductase homolog 
 cit-r.1   102621681   chloroplast envelope quinone oxidoreductase homolog 
 cit-r.1   102620917   chloroplast envelope quinone oxidoreductase homolog 
 gma-u.5   100790762   chloroplast envelope quinone oxidoreductase homolog 
 gma-u.5   100815485   chloroplast envelope quinone oxidoreductase homolog 
 gma-u.5   100782744   chloroplast envelope quinone oxidoreductase homolog 
 vvi-u.5   100246774   chloroplast envelope quinone oxidoreductase homolog 
 vvi-u.5   100263927   chloroplast envelope quinone oxidoreductase homolog 
 vvi-u.5   100248513   chloroplast envelope quinone oxidoreductase homolog 
 ppo-u.5   7467651   chloroplast envelope quinone oxidoreductase homolog 
 ppo-u.5   18095489   chloroplast envelope quinone oxidoreductase homolog 
 ppo-u.5   18095327   chloroplast envelope quinone oxidoreductase homolog 
 mtr-u.5   120580112   chloroplast envelope quinone oxidoreductase homolog 
 mtr-u.5   25491771   chloroplast envelope quinone oxidoreductase homolog 
 mtr-u.5   25491784   chloroplast envelope quinone oxidoreductase homolog 
 sly-u.5   FBA4   fructose-bisphosphate aldolase 
 sly-u.5   101268312   chloroplast envelope quinone oxidoreductase homolog 
 sot-r.1   102582629   putative quinone-oxidoreductase homolog, chloroplastic 
 nta-r.1   107794056   chloroplast envelope quinone oxidoreductase homolog 
 nta-r.1   107823290   chloroplast envelope quinone oxidoreductase homolog 
 nta-r.1   107815294   chloroplast envelope quinone oxidoreductase homolog 
 osa-u.5   4335574   quinone-oxidoreductase QR1, chloroplastic 
 osa-u.5   4335575   chloroplast envelope quinone oxidoreductase homolog 
 osa-u.5   4347491   chloroplast envelope quinone oxidoreductase homolog 
 zma-u.5   100216803   putative alcohol dehydrogenase superfamily protein 
 zma-u.5   100283038   chloroplastic quinone-oxidoreductase 
 zma-u.5   100281822   uncharacterized LOC100281822 
 tae-r.2   123104274   chloroplast envelope quinone oxidoreductase homolog 
 tae-r.2   123053096   chloroplast envelope quinone oxidoreductase homolog 
 hvu-r.1   123426481   chloroplast envelope quinone oxidoreductase homolog 
 hvu-r.1   123398964   quinone-oxidoreductase QR1, chloroplastic-like 
 hvu-r.1   123430188   chloroplast envelope quinone oxidoreductase homolog 
 sbi-r.1   8058963   quinone-oxidoreductase QR1, chloroplastic 
 sbi-r.1   8086479   chloroplast envelope quinone oxidoreductase homolog 
 sbi-r.1   8056985   chloroplast envelope quinone oxidoreductase homolog 
 bdi-r.1   100823424   chloroplast envelope quinone oxidoreductase homolog 
 bdi-r.1   100841159   chloroplast envelope quinone oxidoreductase homolog 

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Top 50 coexpressed genes to 121232161 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121232161 (ghi-r.1 coexpression data)

CoexMap"121232161"


ghiLOC121232161 | Entrez gene ID : 121232161    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 3 3 3 3 3 2 1 3 3 3 2 3 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00592 [list] [network] alpha-Linolenic acid metabolism (140 genes)
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (3258 genes)  IEA  
Protein XP_040973576.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  E.R._vacu 1  (predict for XP_040973576.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040973576.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121232161
ghi-r.1
for
121219405
ghi-r.1
for
107943452
ghi-r.1
for
107954963
ath-u.5
for
AT4G13010
bra-r.6
for
103859168
bna-r.1
for
111198735
bna-r.1
for
106347803
cit-r.1
for
102609111
cit-r.1
for
102621681
cit-r.1
for
102620917
gma-u.5
for
100790762
gma-u.5
for
100815485
gma-u.5
for
100782744
vvi-u.5
for
100246774
vvi-u.5
for
100263927
vvi-u.5
for
100248513
ppo-u.5
for
7467651
ppo-u.5
for
18095489
ppo-u.5
for
18095327
mtr-u.5
for
120580112
mtr-u.5
for
25491771
mtr-u.5
for
25491784
sly-u.5
for
FBA4
sly-u.5
for
101268312
sot-r.1
for
102582629
nta-r.1
for
107794056
nta-r.1
for
107823290
nta-r.1
for
107815294
osa-u.5
for
4335574
osa-u.5
for
4335575
osa-u.5
for
4347491
zma-u.5
for
100216803
zma-u.5
for
100283038
zma-u.5
for
100281822
tae-r.2
for
123104274
tae-r.2
for
123053096
hvu-r.1
for
123426481
hvu-r.1
for
123398964
hvu-r.1
for
123430188
sbi-r.1
for
8058963
sbi-r.1
for
8086479
sbi-r.1
for
8056985
bdi-r.1
for
100823424
bdi-r.1
for
100841159


Ortholog ID: 994
Species ghi ghi ghi ath bra bna bna cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107954963 LOC107954964 LOC107954965 AT4G13010 LOC103859168 LOC111198735 LOC106347803 LOC102609111 LOC102621681 LOC102620917 LOC100790762 LOC100815485 LOC100782744 LOC100246774 LOC100248513 LOC7467651 LOC18095489 LOC7467650 LOC120580112 LOC120580114 LOC120580113 FBA4 LOC101268312 LOC102582629 LOC107815294 LOC107801723 LOC107770378 LOC4347491 LOC107276584 LOC4347495 LOC100283038 LOC100281822 LOC103647563 LOC123104274 LOC123189004 LOC123430188 LOC123399690 LOC8058963 LOC8086479 LOC8056985 LOC100823424 LOC100841159
Function* chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog Oxidoreductase, zinc-binding dehydrogenase family protein chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog fructose-bisphosphate aldolase chloroplast envelope quinone oxidoreductase homolog putative quinone-oxidoreductase homolog, chloroplastic chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog quinone-oxidoreductase QR1, chloroplastic chloroplast envelope quinone oxidoreductase homolog chloroplastic quinone-oxidoreductase uncharacterized LOC100281822 putative quinone-oxidoreductase homolog, chloroplastic chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog quinone-oxidoreductase QR1, chloroplastic chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog chloroplast envelope quinone oxidoreductase homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
ghi04075 Plant hormone signal transduction 3
ghi04142 Lysosome 2
ghi04626 Plant-pathogen interaction 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 2
bna00592 alpha-Linolenic acid metabolism 2
bna00906 Carotenoid biosynthesis 2
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 2
bna00592 alpha-Linolenic acid metabolism 2
bna00906 Carotenoid biosynthesis 2
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00073 Cutin, suberine and wax biosynthesis 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 8
ppo00592 alpha-Linolenic acid metabolism 3
ppo03040 Spliceosome 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 3
ppo03040 Spliceosome 3
ppo03018 RNA degradation 3
ppo03082 ATP-dependent chromatin remodeling 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 7
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 7
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta04130 SNARE interactions in vesicular transport 2
nta00592 alpha-Linolenic acid metabolism 2
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta04130 SNARE interactions in vesicular transport 2
nta00592 alpha-Linolenic acid metabolism 2
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 5
zma04712 Circadian rhythm - plant 2
zma00592 alpha-Linolenic acid metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04626 Plant-pathogen interaction 3
zma00592 alpha-Linolenic acid metabolism 2
zma00360 Phenylalanine metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 3
tae00908 Zeatin biosynthesis 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 5
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954963 107954964 107954965 826914 103859168 111198735 106347803 102609111 102621681 102620917 100790762 100815485 100782744 100246774 100248513 7467651 18095489 7467650 120580112 120580114 120580113 101243822 101268312 102582629 107815294 107801723 107770378 4347491 107276584 4347495 100283038 100281822 103647563 123104274 123189004 123430188 123399690 8058963 8086479 8056985 100823424 100841159
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