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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121232344   two-component response regulator ARR2 
 ghi-r.1   107936125   two-component response regulator ARR1 
 ghi-r.1   107944908   two-component response regulator ARR1 
 ghi-r.1   107936099   two-component response regulator ARR2 
 ath-u.5   RR1   response regulator 1 
 ath-u.5   RR2   response regulator 2 
 bra-r.6   103859684   two-component response regulator ARR1 
 bra-r.6   103869728   two-component response regulator ARR1 
 bra-r.6   103870141   two-component response regulator ARR2 
 bna-r.1   111214639   two-component response regulator ARR1-like 
 bna-r.1   106452072   two-component response regulator ARR1 
 bna-r.1   106439443   two-component response regulator ARR1-like 
 cit-r.1   102607197   two-component response regulator ARR2 
 gma-u.5   100814930   two-component response regulator ARR2 
 gma-u.5   100809583   two-component response regulator ARR2 
 gma-u.5   100781102   two-component response regulator ARR2 
 vvi-u.5   100263661   two-component response regulator ARR1 
 ppo-u.5   7477193   two-component response regulator ARR2 
 ppo-u.5   18101870   two-component response regulator ARR2 
 mtr-u.5   11420048   two-component response regulator ARR2 
 mtr-u.5   25494105   two-component response regulator ARR2 
 sly-u.5   101267446   two-component response regulator ARR2 
 sly-u.5   101266334   two-component response regulator ARR1 
 sot-r.1   102586468   two-component response regulator ARR1-like 
 sot-r.1   102578736   two-component response regulator ARR2-like 
 nta-r.1   107827910   two-component response regulator ARR2 
 nta-r.1   107807556   two-component response regulator ARR2 
 nta-r.1   107806685   two-component response regulator ARR1-like 

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Top 50 coexpressed genes to 121232344 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121232344 (ghi-r.1 coexpression data)

CoexMap"121232344"


ghiLOC121232344 | Entrez gene ID : 121232344    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 4 2 3 3 1 3 1 2 2 2 2 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (133 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (327 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_040974045.1 [sequence] [blastp]
XP_040974046.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_040974045.1)
nucl 7,  cyto 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_040974046.1)
Subcellular
localization
TargetP
other 5  (predict for XP_040974045.1)
other 6,  mito 4  (predict for XP_040974046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121232344
ghi-r.1
for
107936125
ghi-r.1
for
107944908
ghi-r.1
for
107936099
ath-u.5
for
RR1
ath-u.5
for
RR2
bra-r.6
for
103859684
bra-r.6
for
103869728
bra-r.6
for
103870141
bna-r.1
for
111214639
bna-r.1
for
106452072
bna-r.1
for
106439443
cit-r.1
for
102607197
gma-u.5
for
100814930
gma-u.5
for
100809583
gma-u.5
for
100781102
vvi-u.5
for
100263661
ppo-u.5
for
7477193
ppo-u.5
for
18101870
mtr-u.5
for
11420048
mtr-u.5
for
25494105
sly-u.5
for
101267446
sly-u.5
for
101266334
sot-r.1
for
102586468
sot-r.1
for
102578736
nta-r.1
for
107827910
nta-r.1
for
107807556
nta-r.1
for
107806685


Ortholog ID: 4910
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta
Symbol LOC107936125 LOC107936099 LOC107896631 RR1 RR2 LOC103869728 LOC103870141 LOC117132498 LOC106439443 LOC106360849 LOC106376222 LOC102607197 LOC100814930 LOC100781102 LOC100781087 LOC100263661 LOC7477193 LOC18101870 LOC11420048 LOC25494105 LOC101267446 LOC101266334 LOC102586468 LOC102578736 LOC107807556 LOC107802370 LOC107775114
Function* two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR2 response regulator 1 response regulator 2 two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR1-like two-component response regulator ARR2-like two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR1-like two-component response regulator ARR2-like two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 4
bra00071 Fatty acid degradation 2
bra00310 Lysine degradation 2
bra00380 Tryptophan metabolism 2
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma04144 Endocytosis 3
gma05100 Bacterial invasion of epithelial cells 3
gma04075 Plant hormone signal transduction 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot05100 Bacterial invasion of epithelial cells 3
sot04142 Lysosome 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936125 107936099 107896631 820940 827297 103869728 103870141 117132498 106439443 106360849 106376222 102607197 100814930 100781102 100781087 100263661 7477193 18101870 11420048 25494105 101267446 101266334 102586468 102578736 107807556 107802370 107775114
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