ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123045588	probable methyltransferase PMT3
tae-r.2	123121176	probable methyltransferase PMT3
tae-r.2	123181075	probable methyltransferase PMT8
hvu-r.1	123431098	probable methyltransferase PMT3
bdi-r.1	100839930	probable methyltransferase PMT3
osa-u.5	4348898	probable methyltransferase PMT3
zma-u.5	103643455	probable methyltransferase PMT1
zma-u.5	100381424	putative methyltransferase PMT3
sbi-r.1	8070486	probable methyltransferase PMT3
ath-u.5	AT3G23300	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT4G14360	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT1G04430	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	102669038	probable methyltransferase PMT3
gma-u.5	102668537	probable methyltransferase PMT3
gma-u.5	100819500	probable methyltransferase PMT3
sly-u.5	101263378	probable methyltransferase PMT3
sly-u.5	104649397	probable methyltransferase PMT3
bra-r.6	103844255	probable methyltransferase PMT8
bra-r.6	103859999	probable methyltransferase PMT1
bra-r.6	103828754	probable methyltransferase PMT1
vvi-u.5	100263157	probable methyltransferase PMT3
vvi-u.5	100243005	probable methyltransferase PMT8
ppo-u.5	7479745	probable methyltransferase PMT8
ppo-u.5	7454354	probable methyltransferase PMT3
mtr-u.5	11425628	probable methyltransferase PMT8
mtr-u.5	25484248	probable methyltransferase PMT3
mtr-u.5	25485778	probable methyltransferase PMT8
ghi-r.1	107936254	probable methyltransferase PMT3
ghi-r.1	107914920	probable methyltransferase PMT3
bna-r.1	106400993	probable methyltransferase PMT8
bna-r.1	111200415	probable methyltransferase PMT8
bna-r.1	106371011	probable methyltransferase PMT8
sot-r.1	102586628	probable methyltransferase PMT3
sot-r.1	102601292	probable methyltransferase PMT3
cit-r.1	102627998	probable methyltransferase PMT8
nta-r.1	107773448	putative methyltransferase PMT3
nta-r.1	107828173	putative methyltransferase PMT3
nta-r.1	107759039	putative methyltransferase PMT3

Top 50 coexpressed genes to 123045588 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123045588 (tae-r.2 coexpression data)

CoexMap"123045588"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(195 genes)	IEA
GO:0005768 [list] [network] endosome	(407 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(13575 genes)	IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(1076 genes)

IEA

Protein

XP_044324641.1 [sequence] [blastp]
XP_044324647.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 2, E.R. 2, cyto_E.R. 2	(predict for XP_044324641.1)
chlo 3, cyto 2, E.R. 2, cyto_E.R. 2	(predict for XP_044324647.1)

Subcellular
localization
TargetP

scret 7, mito 4	(predict for XP_044324641.1)
scret 7, mito 4	(predict for XP_044324647.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123045588	tae-r.2 for 123121176	tae-r.2 for 123181075	hvu-r.1 for 123431098	bdi-r.1 for 100839930	osa-u.5 for 4348898	zma-u.5 for 103643455	zma-u.5 for 100381424	sbi-r.1 for 8070486	ath-u.5 for AT3G23300	ath-u.5 for AT4G14360	ath-u.5 for AT1G04430	gma-u.5 for 102669038	gma-u.5 for 102668537	gma-u.5 for 100819500	sly-u.5 for 101263378	sly-u.5 for 104649397	bra-r.6 for 103844255	bra-r.6 for 103859999	bra-r.6 for 103828754	vvi-u.5 for 100263157	vvi-u.5 for 100243005	ppo-u.5 for 7479745	ppo-u.5 for 7454354	mtr-u.5 for 11425628	mtr-u.5 for 25484248	mtr-u.5 for 25485778	ghi-r.1 for 107936254	ghi-r.1 for 107914920	bna-r.1 for 106400993	bna-r.1 for 111200415	bna-r.1 for 106371011	sot-r.1 for 102586628	sot-r.1 for 102601292	cit-r.1 for 102627998	nta-r.1 for 107773448	nta-r.1 for 107828173	nta-r.1 for 107759039

Ortholog

Ortholog ID: 3340

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*