ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123045753	protein NBR1 homolog
tae-r.2	123189527	protein NBR1 homolog
tae-r.2	123144684	protein JOKA2
tae-r.2	123137309	protein JOKA2
hvu-r.1	123427004	protein NBR1 homolog
hvu-r.1	123403910	protein NBR1 homolog
bdi-r.1	100838446	protein NBR1 homolog
bdi-r.1	100826577	protein NBR1 homolog
osa-u.5	4336158	protein NBR1 homolog
osa-u.5	4329846	protein NBR1 homolog
zma-u.5	100275089	Protein NBR1-like protein
zma-u.5	103648570	protein NBR1 homolog
sbi-r.1	8070589	protein NBR1 homolog
sbi-r.1	8073586	protein NBR1 homolog
ath-u.5	NBR1	ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
gma-u.5	100816395	protein NBR1 homolog
gma-u.5	100778692	protein JOKA2
sly-u.5	101268268	protein JOKA2
sly-u.5	101254702	protein JOKA2
bra-r.6	103862466	protein NBR1 homolog
bra-r.6	103861501	protein NBR1 homolog
bra-r.6	103834897	protein NBR1 homolog
vvi-u.5	100253588	protein JOKA2
ppo-u.5	7484413	protein JOKA2
ppo-u.5	7457775	protein JOKA2
mtr-u.5	25493711	protein JOKA2
ghi-r.1	107937455	protein JOKA2
ghi-r.1	107949640	protein NBR1 homolog
ghi-r.1	107924432	protein NBR1 homolog
bna-r.1	106427403	protein NBR1 homolog
bna-r.1	111208195	protein NBR1 homolog
bna-r.1	106440775	protein NBR1 homolog
sot-r.1	102582603	protein NBR1 homolog
sot-r.1	102585254	protein NBR1 homolog
cit-r.1	102622663	protein NBR1 homolog
nta-r.1	107772919	protein NBR1 homolog
nta-r.1	107781766	protein JOKA2
nta-r.1	107791306	protein JOKA2

Top 50 coexpressed genes to 123045753 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123045753 (tae-r.2 coexpression data)

CoexMap"123045753"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(2838 genes)	IEA
GO:0005515 [list] [network] protein binding	(16249 genes)	IEA

Protein

XP_044324863.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_044324863.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for XP_044324863.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123045753	tae-r.2 for 123189527	tae-r.2 for 123144684	tae-r.2 for 123137309	hvu-r.1 for 123427004	hvu-r.1 for 123403910	bdi-r.1 for 100838446	bdi-r.1 for 100826577	osa-u.5 for 4336158	osa-u.5 for 4329846	zma-u.5 for 100275089	zma-u.5 for 103648570	sbi-r.1 for 8070589	sbi-r.1 for 8073586	ath-u.5 for NBR1	gma-u.5 for 100816395	gma-u.5 for 100778692	sly-u.5 for 101268268	sly-u.5 for 101254702	bra-r.6 for 103862466	bra-r.6 for 103861501	bra-r.6 for 103834897	vvi-u.5 for 100253588	ppo-u.5 for 7484413	ppo-u.5 for 7457775	mtr-u.5 for 25493711	ghi-r.1 for 107937455	ghi-r.1 for 107949640	ghi-r.1 for 107924432	bna-r.1 for 106427403	bna-r.1 for 111208195	bna-r.1 for 106440775	sot-r.1 for 102582603	sot-r.1 for 102585254	cit-r.1 for 102622663	nta-r.1 for 107772919	nta-r.1 for 107781766	nta-r.1 for 107791306

Ortholog

Ortholog ID: 3964

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NBR1

Function^*

protein NBR1 homolog

protein JOKA2

protein NBR1 homolog

Protein NBR1-like protein

protein NBR1 homolog

ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein

protein NBR1 homolog

protein JOKA2

protein NBR1 homolog

protein JOKA2

protein NBR1 homolog

protein JOKA2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00020	Citrate cycle (TCA cycle)	3
tae01200	Carbon metabolism	3
tae01210	2-Oxocarboxylic acid metabolism	3
tae01230	Biosynthesis of amino acids	3
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi04075	Plant hormone signal transduction	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	4
ath03050	Proteasome	3
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma04142	Lysosome	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	5
bra03250	Viral life cycle - HIV-1	2
bra03272	Virion - Hepatitis viruses	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	4
bra01212	Fatty acid metabolism	4
bra00592	alpha-Linolenic acid metabolism	3
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3
ppo04145	Phagosome	3
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi03018	RNA degradation	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	6
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	5
nta03050	Proteasome	4
nta04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	5
nta03050	Proteasome	4
nta04120	Ubiquitin mediated proteolysis	3

Expression

Expression pattern

Entrez Gene ID^*

123189527

123137309

123053635

123427004

123403910

100838446

100826577

4336158

4329846

100275089

103648570

8070589

8073586

828571

100816395

100778692

101268268

101254702

103862466

103861501

103834897

100253588

7484413

7457775

25493711

107937455

107949640

107886212

106427403

111208195

106440775

102582603

102585254

102622663

107781766

107791306

107828388

The preparation time of this page was 0.3 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	2	2	1	2	2	3	1	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123045753 (tae-r.2 coexpression data)

Top 50 enrichment test to 123045753 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**