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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123054513   uncharacterized LOC123054513 
 tae-r.2   123046644   uncharacterized LOC123046644 
 tae-r.2   123190368   uncharacterized LOC123190368 
 hvu-r.1   123427877   uncharacterized LOC123427877 
 osa-u.5   4342939   protein SLOW GREEN 1, chloroplastic 
 zma-u.5   100193007   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sbi-r.1   8057297   uncharacterized LOC8057297 
 ath-u.5   AT1G78915   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100790462   uncharacterized LOC100790462 
 gma-u.5   100777868   uncharacterized LOC100777868 
 sly-u.5   101262497   uncharacterized LOC101262497 
 bra-r.6   103830509   uncharacterized LOC103830509 
 vvi-u.5   100258138   uncharacterized LOC100258138 
 ppo-u.5   7497774   uncharacterized LOC7497774 
 mtr-u.5   25491160   uncharacterized LOC25491160 
 ghi-r.1   107902037   uncharacterized LOC107902037 
 ghi-r.1   107962158   uncharacterized LOC107962158 
 bna-r.1   106353431   uncharacterized LOC106353431 
 bna-r.1   106397147   uncharacterized LOC106397147 
 sot-r.1   102600762   uncharacterized LOC102600762 
 cit-r.1   102618377   uncharacterized LOC102618377 
 nta-r.1   107764424   uncharacterized LOC107764424 
 nta-r.1   107779489   uncharacterized LOC107779489 
 cre-r.1   CHLRE_12g554103v5   uncharacterized protein 

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Top 50 coexpressed genes to 123054513 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123054513 (tae-r.2 coexpression data)

CoexMap"123054513"


taeLOC123054513 | Entrez gene ID : 123054513    
Species tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre bdi
Paralog 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (303 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044334229.1 [sequence] [blastp]
XP_044334230.1 [sequence] [blastp]
XP_044334231.1 [sequence] [blastp]
XP_044334233.1 [sequence] [blastp]
XP_044334234.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_044334229.1)
chlo 8,  mito 2  (predict for XP_044334230.1)
chlo 3,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1,  nucl 1,  extr 1,  vacu 1,  pero 1,  cyto_mito 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_044334231.1)
chlo 3,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1,  nucl 1,  extr 1,  vacu 1,  pero 1,  cyto_mito 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_044334233.1)
chlo 3,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1,  nucl 1,  extr 1,  vacu 1,  pero 1,  cyto_mito 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_044334234.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044334229.1)
mito 7  (predict for XP_044334230.1)
other 6,  chlo 3  (predict for XP_044334231.1)
other 6,  chlo 3  (predict for XP_044334233.1)
other 6,  chlo 3  (predict for XP_044334234.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123054513
tae-r.2
for
123046644
tae-r.2
for
123190368
hvu-r.1
for
123427877
osa-u.5
for
4342939
zma-u.5
for
100193007
sbi-r.1
for
8057297
ath-u.5
for
AT1G78915
gma-u.5
for
100790462
gma-u.5
for
100777868
sly-u.5
for
101262497
bra-r.6
for
103830509
vvi-u.5
for
100258138
ppo-u.5
for
7497774
mtr-u.5
for
25491160
ghi-r.1
for
107902037
ghi-r.1
for
107962158
bna-r.1
for
106353431
bna-r.1
for
106397147
sot-r.1
for
102600762
cit-r.1
for
102618377
nta-r.1
for
107764424
nta-r.1
for
107779489
cre-r.1
for
CHLRE_12g554103v5


Ortholog ID: 11141
Species tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123054513 LOC123046644 LOC123190368 LOC123427877 LOC4342939 LOC100193007 LOC8057297 AT1G78915 LOC100790462 LOC100777868 LOC101262497 LOC103830509 LOC100258138 LOC7497774 LOC25491160 LOC107902037 LOC107962158 LOC106353431 LOC106397147 LOC102600762 LOC102618377 LOC107764424 LOC107779489 CHLRE_12g554103v5
Function* uncharacterized LOC123054513 uncharacterized LOC123046644 uncharacterized LOC123190368 uncharacterized LOC123427877 protein SLOW GREEN 1, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein uncharacterized LOC8057297 Tetratricopeptide repeat (TPR)-like superfamily protein uncharacterized LOC100790462 uncharacterized LOC100777868 uncharacterized LOC101262497 uncharacterized LOC103830509 uncharacterized LOC100258138 uncharacterized LOC7497774 uncharacterized LOC25491160 uncharacterized LOC107902037 uncharacterized LOC107962158 uncharacterized LOC106353431 uncharacterized LOC106397147 uncharacterized LOC102600762 uncharacterized LOC102618377 uncharacterized LOC107764424 uncharacterized LOC107779489 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
tae00270 Cysteine and methionine metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
tae01212 Fatty acid metabolism 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123054513 123046644 123190368 123427877 4342939 100193007 8057297 844230 100790462 100777868 101262497 103830509 100258138 7497774 25491160 107902037 107962158 106353431 106397147 102600762 102618377 107764424 107779489 5728576
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