Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100787465  probable polygalacturonase At1g80170 
 sly-u.5  101256371  probable polygalacturonase At3g15720 
 sly-u.5  PGcat  polygalacturonase 
 mtr-u.5  25495857  probable polygalacturonase At3g15720 
 mtr-u.5  11431564  probable polygalacturonase At1g80170 

close


Top 50 coexpressed genes to 100787465 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100787465 (gma-u.5 coexpression data)

CoexMap"123055882"


taeLOC123055882 | Entrez gene ID : 123055882
Species gma sly mtr bdi bra ath ppo sbi ghi sot nta cre tae zma hvu vvi cit bna osa
Paralog 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00040 [list] [network] Pentose and glucuronate interconversions (238 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (2549 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (142 genes)  IEA  
Protein XP_044335639.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 3,  nucl 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_044335639.1)
Subcellular
localization
TargetP
other 9,  scret 3  (predict for XP_044335639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100787465


sly-u.5
for
101256371


sly-u.5
for
PGcat


mtr-u.5
for
25495857


mtr-u.5
for
11431564



Ortholog ID: 2099
Species gma sly sly sot nta nta
Symbol LOC100787465 PGcat LOC101256371 LOC102602941 LOC107761023 LOC107776714
Function* probable polygalacturonase At1g80170 polygalacturonase probable polygalacturonase At3g15720 probable polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 3
sly01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 3
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787465 543587 101256371 102602941 107761023 107776714
The preparation time of this page was 0.2 [sec].