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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123061714  splicing factor U2af small subunit B 
 tae-r.2  123104186  splicing factor U2af small subunit A 
 tae-r.2  123068262  splicing factor U2af small subunit B 
 tae-r.2  123070314  splicing factor U2af small subunit B 
 hvu-r.1  123399446  splicing factor U2af small subunit A-like 
 hvu-r.1  123444062  splicing factor U2af small subunit B-like 
 hvu-r.1  123450295  splicing factor U2af small subunit B-like 
 bdi-r.1  100822535  splicing factor U2af small subunit B 
 bdi-r.1  100832894  splicing factor U2af small subunit A 
 bdi-r.1  100827377  splicing factor U2af small subunit B 
 osa-u.5  4339621  splicing factor U2af small subunit B 
 osa-u.5  9268567  splicing factor U2af small subunit A-like 
 zma-u.5  100272749  uncharacterized LOC100272749 
 zma-u.5  100282114  splicing factor U2af 38 kDa subunit 
 zma-u.5  100191858  splicing factor U2af subunit 
 sbi-r.1  110432231  splicing factor U2af small subunit A-like 
 sbi-r.1  8063598  splicing factor U2af small subunit B 
 sbi-r.1  8080823  splicing factor U2af small subunit B 
 ath-u.5  U2AF35B  Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-u.5  ATU2AF35A  U2 snRNP auxiliary factor small subunit 
 gma-u.5  100811622  splicing factor U2af small subunit B 
 gma-u.5  100792507  splicing factor U2af small subunit A 
 gma-u.5  100799606  splicing factor U2af small subunit B 
 sly-u.5  101263952  splicing factor U2af small subunit B 
 sly-u.5  101245917  splicing factor U2af small subunit B 
 bra-r.6  103829051  splicing factor U2af small subunit A-like 
 bra-r.6  103839277  splicing factor U2af small subunit B 
 bra-r.6  103835383  splicing factor U2af small subunit A 
 vvi-u.5  100266834  splicing factor U2af small subunit B 
 vvi-u.5  100247727  splicing factor U2af small subunit B 
 ppo-u.5  18100077  splicing factor U2af small subunit B 
 ppo-u.5  18097994  splicing factor U2af small subunit B 
 ppo-u.5  7474543  splicing factor U2af small subunit B 
 mtr-u.5  25499390  splicing factor U2af small subunit B 
 mtr-u.5  25487504  splicing factor U2af small subunit B 
 ghi-r.1  107951030  splicing factor U2af small subunit B 
 ghi-r.1  107936496  splicing factor U2af small subunit B 
 bna-r.1  106447072  splicing factor U2af small subunit B 
 bna-r.1  106425342  splicing factor U2af small subunit A 
 bna-r.1  125577879  splicing factor U2af small subunit B-like 
 sot-r.1  102590524  splicing factor U2af small subunit B-like 
 sot-r.1  102596690  splicing factor U2af small subunit B-like 
 cit-r.1  102631146  splicing factor U2af small subunit B-like 
 cit-r.1  102615618  splicing factor U2af small subunit B 
 cit-r.1  102616318  splicing factor U2af small subunit B-like 
 nta-r.1  107782838  splicing factor U2af small subunit B 
 nta-r.1  107775509  splicing factor U2af small subunit B 
 nta-r.1  107782256  splicing factor U2af small subunit B 
 cre-r.1  CHLRE_06g250950v5  uncharacterized protein 

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Top 50 coexpressed genes to 123061714 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123061714 (tae-r.2 coexpression data)

CoexMap"123061714"


taeLOC123061714 | Entrez gene ID : 123061714
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 2 3 3 2 3 2 3 2 3 2 2 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (447 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (13 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (7531 genes)  IEA  
Protein XP_044340863.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_044340863.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044340863.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123061714


tae-r.2
for
123104186


tae-r.2
for
123068262


tae-r.2
for
123070314


hvu-r.1
for
123399446


hvu-r.1
for
123444062


hvu-r.1
for
123450295


bdi-r.1
for
100822535


bdi-r.1
for
100832894


bdi-r.1
for
100827377


osa-u.5
for
4339621


osa-u.5
for
9268567


zma-u.5
for
100272749


zma-u.5
for
100282114


zma-u.5
for
100191858


sbi-r.1
for
110432231


sbi-r.1
for
8063598


sbi-r.1
for
8080823


ath-u.5
for
U2AF35B


ath-u.5
for
ATU2AF35A


gma-u.5
for
100811622


gma-u.5
for
100792507


gma-u.5
for
100799606


sly-u.5
for
101263952


sly-u.5
for
101245917


bra-r.6
for
103829051


bra-r.6
for
103839277


bra-r.6
for
103835383


vvi-u.5
for
100266834


vvi-u.5
for
100247727


ppo-u.5
for
18100077


ppo-u.5
for
18097994


ppo-u.5
for
7474543


mtr-u.5
for
25499390


mtr-u.5
for
25487504


ghi-r.1
for
107951030


ghi-r.1
for
107936496


bna-r.1
for
106447072


bna-r.1
for
106425342


bna-r.1
for
125577879


sot-r.1
for
102590524


sot-r.1
for
102596690


cit-r.1
for
102631146


cit-r.1
for
102615618


cit-r.1
for
102616318


nta-r.1
for
107782838


nta-r.1
for
107775509


nta-r.1
for
107782256


cre-r.1
for
CHLRE_06g250950v5



Ortholog ID: 1944
Species tae tae tae hvu hvu hvu bdi bdi bdi osa osa zma zma zma sbi sbi sbi ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna sot sot cit cit cit nta nta nta cre
Symbol LOC123068262 LOC123070314 LOC123121943 LOC123399446 LOC123444062 LOC123450295 LOC100822535 LOC100832894 LOC100827377 LOC4339621 LOC9268567 LOC100282114 LOC100284238 LOC103652188 LOC110432231 LOC8063598 LOC8080823 U2AF35B ATU2AF35A LOC100811622 LOC100799606 LOC100794975 LOC101263952 LOC101245917 LOC103829051 LOC103839277 LOC103835383 LOC100266834 LOC100247727 LOC18100077 LOC18097994 LOC7494732 LOC25499390 LOC25487504 LOC107951030 LOC107912780 LOC125577879 LOC106381636 LOC106389581 LOC102590524 LOC102596690 LOC102631146 LOC102615618 LOC102616318 LOC107775509 LOC107789911 LOC107810075 CHLRE_06g250950v5
Function* splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit A splicing factor U2af small subunit A-like splicing factor U2af small subunit B-like splicing factor U2af small subunit B-like splicing factor U2af small subunit B splicing factor U2af small subunit A splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit A-like splicing factor U2af 38 kDa subunit splicing factor U2af 38 kDa subunit splicing factor U2af small subunit B splicing factor U2af small subunit A-like splicing factor U2af small subunit B splicing factor U2af small subunit B Zinc finger C-x8-C-x5-C-x3-H type family protein U2 snRNP auxiliary factor small subunit splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit A-like splicing factor U2af small subunit B splicing factor U2af small subunit A splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B splicing factor U2af small subunit B-like splicing factor U2af small subunit B-like splicing factor U2af small subunit A splicing factor U2af small subunit B-like splicing factor U2af small subunit B-like splicing factor U2af small subunit B-like splicing factor U2af small subunit B splicing factor U2af small subunit B-like splicing factor U2af small subunit B splicing factor U2af small subunit B-like splicing factor U2af small subunit B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
hvu04141 Protein processing in endoplasmic reticulum 5
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03022 Basal transcription factors 2
hvu03040 Spliceosome 2
hvu04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
bdi03013 Nucleocytoplasmic transport 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03015 mRNA surveillance pathway 3
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03040 Spliceosome 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
sbi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04141 Protein processing in endoplasmic reticulum 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04016 MAPK signaling pathway - plant 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 10
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit00500 Starch and sucrose metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 13
cre03013 Nucleocytoplasmic transport 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123068262 123070314 123121943 123399446 123444062 123450295 100822535 100832894 100827377 4339621 9268567 100282114 100284238 103652188 110432231 8063598 8080823 834293 839657 100811622 100799606 100794975 101263952 101245917 103829051 103839277 103835383 100266834 100247727 18100077 18097994 7494732 25499390 25487504 107951030 107912780 125577879 106381636 106389581 102590524 102596690 102631146 102615618 102616318 107775509 107789911 107810075 5722203
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