ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123062723	protein YIP4b
tae-r.2	123071545	protein YIP4b
tae-r.2	123079882	protein YIP4b
hvu-r.1	123444797	protein YIP4b-like
bdi-r.1	100825086	protein YIPF6 homolog
bdi-r.1	100836638	protein YIPF6 homolog
osa-u.5	4338906	protein YIP4b
osa-u.5	4325047	protein YIP4b
zma-u.5	100284081	uncharacterized LOC100284081
zma-u.5	100281275	yip1 domain family member 6
zma-u.5	100273791	uncharacterized LOC100273791
sbi-r.1	8062380	protein YIPF6 homolog
ath-u.5	AT2G18840	Integral membrane Yip1 family protein
ath-u.5	AT4G30260	Integral membrane Yip1 family protein
gma-u.5	100796840	protein YIP4a
gma-u.5	100798534	protein YIP4a
sly-u.5	101243799	protein YIP4b-like
sly-u.5	101268483	protein YIP4b-like
sly-u.5	101268773	protein YIP4b-like
bra-r.6	103834680	protein YIPF6 homolog
bra-r.6	103852799	protein YIPF6 homolog
vvi-u.5	100247852	protein YIP4b
ppo-u.5	18100506	protein YIP4b
ppo-u.5	7461587	protein YIP4b
mtr-u.5	11419607	protein YIP4b
ghi-r.1	107925078	protein YIP4b
ghi-r.1	107958499	protein YIP4b
ghi-r.1	107930425	protein YIP4b
bna-r.1	106391970	protein YIP4b
bna-r.1	106391738	protein YIP4b-like
bna-r.1	106424206	protein YIP4b
sot-r.1	102600353	protein YIPF6 homolog
sot-r.1	102600030	protein YIPF6 homolog
cit-r.1	102630939	protein YIP4b
nta-r.1	107793956	protein YIP4b
nta-r.1	107783774	protein YIP4b-like
cre-r.1	CHLRE_07g326400v5	uncharacterized protein

Top 50 coexpressed genes to 123062723 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123062723 (tae-r.2 coexpression data)

CoexMap"123062723"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport

(244 genes)

IEA

GO CC

GO:0005802 [list] [network] trans-Golgi network	(195 genes)	IEA
GO:0016020 [list] [network] membrane	(10843 genes)	IEA

GO MF

Protein

XP_044342295.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_044342295.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for XP_044342295.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123062723	tae-r.2 for 123071545	tae-r.2 for 123079882	hvu-r.1 for 123444797	bdi-r.1 for 100825086	bdi-r.1 for 100836638	osa-u.5 for 4338906	osa-u.5 for 4325047	zma-u.5 for 100284081	zma-u.5 for 100281275	zma-u.5 for 100273791	sbi-r.1 for 8062380	ath-u.5 for AT2G18840	ath-u.5 for AT4G30260	gma-u.5 for 100796840	gma-u.5 for 100798534	sly-u.5 for 101243799	sly-u.5 for 101268483	sly-u.5 for 101268773	bra-r.6 for 103834680	bra-r.6 for 103852799	vvi-u.5 for 100247852	ppo-u.5 for 18100506	ppo-u.5 for 7461587	mtr-u.5 for 11419607	ghi-r.1 for 107925078	ghi-r.1 for 107958499	ghi-r.1 for 107930425	bna-r.1 for 106391970	bna-r.1 for 106391738	bna-r.1 for 106424206	sot-r.1 for 102600353	sot-r.1 for 102600030	cit-r.1 for 102630939	nta-r.1 for 107793956	nta-r.1 for 107783774	cre-r.1 for CHLRE_07g326400v5

Ortholog

Ortholog ID: 3651

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

protein YIP4b

protein YIP4b-like

protein YIPF6 homolog

protein YIP4b

uncharacterized LOC100284081

yip1 domain family member 6

uncharacterized LOC100273791

protein YIPF6 homolog

Integral membrane Yip1 family protein

protein YIP4a

protein YIP4b-like

protein YIPF6 homolog

protein YIP4b

protein YIP4b-like

protein YIPF6 homolog

protein YIP4b

protein YIP4b-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2
osa00513	Various types of N-glycan biosynthesis	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04136	Autophagy - other	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2
sbi04141	Protein processing in endoplasmic reticulum	2
sbi04145	Phagosome	2
sbi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2
ath00230	Purine metabolism	2
ath00240	Pyrimidine metabolism	2
ath01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	4
gma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	2
sly00513	Various types of N-glycan biosynthesis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	2
sly00513	Various types of N-glycan biosynthesis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	5
vvi04144	Endocytosis	4
vvi03083	Polycomb repressive complex	2
vvi00510	N-Glycan biosynthesis	2
vvi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2
bna00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	3
nta00513	Various types of N-glycan biosynthesis	3
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre04130	SNARE interactions in vesicular transport	2

Expression

Expression pattern

Entrez Gene ID^*

123071545

123134745

123444797

100825086

100836638

4338906

4325047

100284081

100281275

100273791

8062380

816399

829149

100796840

100798534

101243799

101268483

101268773

103834680

103852799

100247852

18100506

7461587

11419607

107925078

107930425

107902748

106391970

106424206

106390050

102600353

102600030

102630939

107793956

107783774

5716247

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	2	2	3	1	2	2	3	2	1	2	1	3	3	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123062723 (tae-r.2 coexpression data)

Top 50 enrichment test to 123062723 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**