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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123449949   E3 ubiquitin-protein ligase SINA-like 10 
 bdi-r.1   100824582   E3 ubiquitin-protein ligase SINA-like 7 
 zma-u.5   100273809   Ubiquitin-protein ligase/ zinc ion binding protein 
 sbi-r.1   8069514   E3 ubiquitin-protein ligase SINA-like 11 
 gma-u.5   100797881   E3 ubiquitin-protein ligase SINA-like 10 
 gma-u.5   100778869   E3 ubiquitin-protein ligase SINA-like 10 
 sly-u.5   101262896   putative E3 ubiquitin-protein ligase SINA-like 
 bra-r.6   103831113   E3 ubiquitin-protein ligase SINA-like 2 
 bra-r.6   103850097   E3 ubiquitin-protein ligase SINA-like 10 
 vvi-u.5   100260463   E3 ubiquitin-protein ligase SINA-like 7 
 ppo-u.5   7494532   E3 ubiquitin-protein ligase SINA-like 7 
 ppo-u.5   18106453   E3 ubiquitin-protein ligase SINA-like 7 
 mtr-u.5   11445862   E3 ubiquitin-protein ligase SINA-like 10 
 ghi-r.1   107912704   E3 ubiquitin-protein ligase SINA-like 10 
 ghi-r.1   107916650   E3 ubiquitin-protein ligase SINA-like 10 
 bna-r.1   106403003   E3 ubiquitin-protein ligase SINA-like 2 
 sot-r.1   102583504   uncharacterized LOC102583504 
 cit-r.1   102613468   E3 ubiquitin-protein ligase SINA-like 10 
 cit-r.1   102612987   E3 ubiquitin-protein ligase SINA-like 4 
 nta-r.1   107810964   E3 ubiquitin-protein ligase SINA-like 7 
 nta-r.1   107825820   uncharacterized LOC107825820 
 cre-r.1   CHLRE_14g630150v5   uncharacterized protein 

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Top 50 coexpressed genes to 123449949 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123449949 (hvu-r.1 coexpression data)

CoexMap"123073727"


taeLOC123073727 | Entrez gene ID : 123073727    
Species hvu bdi zma sbi gma sly bra vvi ppo mtr ghi bna sot cit nta cre osa tae ath
Paralog 1 1 1 1 2 1 2 1 2 1 2 1 1 2 2 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes04120 [list] [network] Ubiquitin mediated proteolysis (715 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (667 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
Protein XP_044352710.1 [sequence] [blastp]
XP_044352711.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_044352710.1)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_044352711.1)
Subcellular
localization
TargetP
other 5  (predict for XP_044352710.1)
other 5  (predict for XP_044352711.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123449949
bdi-r.1
for
100824582
zma-u.5
for
100273809
sbi-r.1
for
8069514
gma-u.5
for
100797881
gma-u.5
for
100778869
sly-u.5
for
101262896
bra-r.6
for
103831113
bra-r.6
for
103850097
vvi-u.5
for
100260463
ppo-u.5
for
7494532
ppo-u.5
for
18106453
mtr-u.5
for
11445862
ghi-r.1
for
107912704
ghi-r.1
for
107916650
bna-r.1
for
106403003
sot-r.1
for
102583504
cit-r.1
for
102613468
cit-r.1
for
102612987
nta-r.1
for
107810964
nta-r.1
for
107825820
cre-r.1
for
CHLRE_14g630150v5


Ortholog ID: 324
Species tae hvu bdi osa zma sbi ath ath gma gma sly bra vvi ppo ppo mtr mtr ghi ghi bna sot cit cit nta nta cre
Symbol LOC123106050 LOC123449949 LOC100824582 LOC4340862 LOC100273809 LOC8058142 AT1G66620 AT5G62800 LOC100797881 LOC100778869 LOC101262084 LOC103831113 LOC100260463 LOC7494532 LOC18106453 LOC11425847 LOC25483069 LOC107912704 LOC107916650 LOC106446346 LOC102583504 LOC102613468 LOC102612987 LOC107810964 LOC107825820 CHLRE_14g630150v5
Function* putative E3 ubiquitin-protein ligase SINA-like 9 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 putative E3 ubiquitin-protein ligase SINA-like 9 Ubiquitin-protein ligase/ zinc ion binding protein putative E3 ubiquitin-protein ligase SINA-like 6 Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domain E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 putative E3 ubiquitin-protein ligase SINA-like 6 E3 ubiquitin-protein ligase SINA-like 2 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 E3 ubiquitin-protein ligase SINA-like 7 polyubiquitin 9 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized LOC102583504 E3 ubiquitin-protein ligase SINA-like 10 E3 ubiquitin-protein ligase SINA-like 4 E3 ubiquitin-protein ligase SINA-like 7 uncharacterized LOC107825820 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00600 Sphingolipid metabolism 3
tae04142 Lysosome 3
tae04136 Autophagy - other 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00590 Arachidonic acid metabolism 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00410 beta-Alanine metabolism 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123106050 123449949 100824582 4340862 100273809 8058142 842980 836401 100797881 100778869 101262084 103831113 100260463 7494532 18106453 11425847 25483069 107912704 107916650 106446346 102583504 102613468 102612987 107810964 107825820 66056318
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