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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123087127   probable transcription factor At5g28040 
 tae-r.2   123095844   probable transcription factor At3g04930 
 tae-r.2   123090836   probable transcription factor At5g28040 
 hvu-r.1   123447421   probable transcription factor At5g28040 
 bdi-r.1   100845859   probable transcription factor At5g28040 
 osa-u.5   9266093   probable transcription factor At3g04930 
 zma-u.5   100193110   uncharacterized LOC100193110 
 zma-u.5   100276272   uncharacterized LOC100276272 
 sbi-r.1   8063399   probable transcription factor At3g04930 
 sly-u.5   101261031   probable transcription factor At5g28040 
 vvi-u.5   100853960   probable transcription factor At5g28040 
 ppo-u.5   7493540   probable transcription factor At5g28040 
 ghi-r.1   107916732   probable transcription factor At5g28040 
 sot-r.1   102597795   uncharacterized LOC102597795 
 cit-r.1   102616693   probable transcription factor At4g00390 
 nta-r.1   107763459   uncharacterized LOC107763459 
 nta-r.1   107815434   uncharacterized LOC107815434 

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Top 50 coexpressed genes to 123087127 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123087127 (tae-r.2 coexpression data)

CoexMap"123087127"


taeLOC123087127 | Entrez gene ID : 123087127    
Species tae hvu bdi osa zma sbi sly vvi ppo ghi sot cit nta mtr gma bra cre ath bna
Paralog 3 1 1 1 2 1 1 1 1 1 1 1 2 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5253 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
Protein XP_044364970.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_044364970.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044364970.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123087127
tae-r.2
for
123095844
tae-r.2
for
123090836
hvu-r.1
for
123447421
bdi-r.1
for
100845859
osa-u.5
for
9266093
zma-u.5
for
100193110
zma-u.5
for
100276272
sbi-r.1
for
8063399
sly-u.5
for
101261031
vvi-u.5
for
100853960
ppo-u.5
for
7493540
ghi-r.1
for
107916732
sot-r.1
for
102597795
cit-r.1
for
102616693
nta-r.1
for
107763459
nta-r.1
for
107815434


Ortholog ID: 13032
Species tae tae tae hvu bdi osa zma zma sbi sly vvi ppo ghi sot cit nta nta
Symbol LOC123087127 LOC123095844 LOC123090836 LOC123447421 LOC100845859 LOC9266093 LOC100193110 LOC100276272 LOC8063399 LOC101261031 LOC100853960 LOC7493540 LOC107916732 LOC102597795 LOC102616693 LOC107763459 LOC107815434
Function* probable transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At3g04930 uncharacterized LOC100193110 uncharacterized LOC100276272 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At5g28040 uncharacterized LOC102597795 probable transcription factor At4g00390 uncharacterized LOC107763459 uncharacterized LOC107815434
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03015 mRNA surveillance pathway 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 2
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123087127 123095844 123090836 123447421 100845859 9266093 100193110 100276272 8063399 101261031 100853960 7493540 107916732 102597795 102616693 107763459 107815434
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