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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123087359   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123095617   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123090572   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 hvu-r.1   123446926   uncharacterized LOC123446926 
 bdi-r.1   100846881   protein disulfide-isomerase LQY1, chloroplastic 
 osa-u.5   9267554   uncharacterized LOC9267554 
 zma-u.5   100276646   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 zma-u.5   100275997   uncharacterized LOC100275997 
 sbi-r.1   8057213   uncharacterized LOC8057213 
 ath-u.5   AT5G17840   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 gma-u.5   100812164   uncharacterized LOC100812164 
 gma-u.5   100306113   uncharacterized LOC100306113 
 sly-u.5   101260778   uncharacterized LOC101260778 
 bra-r.6   103856268   uncharacterized LOC103856268 
 vvi-u.5   100241525   uncharacterized LOC100241525 
 ppo-u.5   7491066   uncharacterized LOC7491066 
 ppo-u.5   7482385   uncharacterized LOC7482385 
 mtr-u.5   11430153   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107940423   uncharacterized LOC107940423 
 ghi-r.1   107893134   uncharacterized LOC107893134 
 ghi-r.1   107937431   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 bna-r.1   106386529   uncharacterized LOC106386529 
 bna-r.1   106433556   uncharacterized LOC106433556 
 sot-r.1   102599970   uncharacterized LOC102599970 
 cit-r.1   102617578   uncharacterized LOC102617578 
 nta-r.1   107761144   uncharacterized LOC107761144 
 nta-r.1   107812351   uncharacterized LOC107812351 

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Top 50 coexpressed genes to 123087359 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123087359 (tae-r.2 coexpression data)

CoexMap"123087359"


taeLOC123087359 | Entrez gene ID : 123087359    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 2 1 1 2 1 1 1 2 1 3 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044365288.1 [sequence] [blastp]
XP_044365289.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_044365288.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_044365289.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_044365288.1)
chlo 8,  mito 5  (predict for XP_044365289.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123087359
tae-r.2
for
123095617
tae-r.2
for
123090572
hvu-r.1
for
123446926
bdi-r.1
for
100846881
osa-u.5
for
9267554
zma-u.5
for
100276646
zma-u.5
for
100275997
sbi-r.1
for
8057213
ath-u.5
for
AT5G17840
gma-u.5
for
100812164
gma-u.5
for
100306113
sly-u.5
for
101260778
bra-r.6
for
103856268
vvi-u.5
for
100241525
ppo-u.5
for
7491066
ppo-u.5
for
7482385
mtr-u.5
for
11430153
ghi-r.1
for
107940423
ghi-r.1
for
107893134
ghi-r.1
for
107937431
bna-r.1
for
106386529
bna-r.1
for
106433556
sot-r.1
for
102599970
cit-r.1
for
102617578
nta-r.1
for
107761144
nta-r.1
for
107812351


Ortholog ID: 8604
Species tae tae tae hvu bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC123087359 LOC123095617 LOC123090572 LOC123446926 LOC100846881 LOC9267554 LOC100276646 LOC100275997 LOC8057213 AT5G17840 LOC100812164 LOC100306113 LOC101260778 LOC103856268 LOC100241525 LOC7491066 LOC7482385 LOC11430153 LOC107940423 LOC107893134 LOC107937431 LOC106386529 LOC106433556 LOC102599970 LOC102617578 LOC107761144 LOC107812351
Function* protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC123446926 protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC9267554 DnaJ/Hsp40 cysteine-rich domain superfamily protein uncharacterized LOC100275997 uncharacterized LOC8057213 DnaJ/Hsp40 cysteine-rich domain superfamily protein uncharacterized LOC100812164 uncharacterized LOC100306113 uncharacterized LOC101260778 uncharacterized LOC103856268 uncharacterized LOC100241525 uncharacterized LOC7491066 uncharacterized LOC7482385 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC107940423 uncharacterized LOC107893134 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC106386529 uncharacterized LOC106433556 uncharacterized LOC102599970 uncharacterized LOC102617578 uncharacterized LOC107761144 uncharacterized LOC107812351
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00020 Citrate cycle (TCA cycle) 6
tae00620 Pyruvate metabolism 6
tae00785 Lipoic acid metabolism 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00020 Citrate cycle (TCA cycle) 6
tae00620 Pyruvate metabolism 6
tae00785 Lipoic acid metabolism 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00020 Citrate cycle (TCA cycle) 6
tae00620 Pyruvate metabolism 6
tae00785 Lipoic acid metabolism 6
tae01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 8
osa01200 Carbon metabolism 8
osa00061 Fatty acid biosynthesis 7
osa01212 Fatty acid metabolism 7
osa00010 Glycolysis / Gluconeogenesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00785 Lipoic acid metabolism 4
zma00010 Glycolysis / Gluconeogenesis 4
zma00620 Pyruvate metabolism 4
zma01200 Carbon metabolism 4
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 8
ath00061 Fatty acid biosynthesis 7
ath01212 Fatty acid metabolism 7
ath00780 Biotin metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00620 Pyruvate metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 6
gma01212 Fatty acid metabolism 6
gma01240 Biosynthesis of cofactors 5
gma00620 Pyruvate metabolism 4
gma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 13
bra01200 Carbon metabolism 13
bra00010 Glycolysis / Gluconeogenesis 9
bra00785 Lipoic acid metabolism 6
bra00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi03010 Ribosome 2
ghi00785 Lipoic acid metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 4
bna00020 Citrate cycle (TCA cycle) 4
bna00620 Pyruvate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00020 Citrate cycle (TCA cycle) 2
bna00620 Pyruvate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00740 Riboflavin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00785 Lipoic acid metabolism 5
nta00230 Purine metabolism 4
nta00730 Thiamine metabolism 4
nta01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00230 Purine metabolism 4
nta00730 Thiamine metabolism 4
nta01232 Nucleotide metabolism 4
nta00785 Lipoic acid metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123087359 123095617 123090572 123446926 100846881 9267554 100276646 100275997 8057213 831652 100812164 100306113 101260778 103856268 100241525 7491066 7482385 11430153 107940423 107893134 107937431 106386529 106433556 102599970 102617578 107761144 107812351
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