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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123088670   plastocyanin, chloroplastic 
 osa-u.5   4339833   plastocyanin, chloroplastic-like 
 zma-u.5   103629356   plastocyanin, chloroplastic 
 zma-u.5   100192779   Plastocyanin major isoform chloroplastic 
 ath-u.5   DRT112   Cupredoxin superfamily protein 
 ath-u.5   PETE1   plastocyanin 1 
 gma-u.5   100306554   plastocyanin 
 gma-u.5   100499708   putative plastocyanin 
 sly-u.5   PETE   plastocyanin, chloroplastic 
 vvi-u.5   100248911   plastocyanin 
 ppo-u.5   7485623   plastocyanin A, chloroplastic 
 ppo-u.5   7496895   plastocyanin B, chloroplastic 
 mtr-u.5   11426844   plastocyanin 

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Top 50 coexpressed genes to 123088670 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123088670 (tae-r.2 coexpression data)

CoexMap"123088670"


taeLOC123088670 | Entrez gene ID : 123088670    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 2 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00195 [list] [network] Photosynthesis (236 genes)
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (17 genes)  IEA  
GO MF
GO:0005507 [list] [network] copper ion binding  (212 genes)  IEA  
Protein XP_044366839.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_044366839.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044366839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123088670
osa-u.5
for
4339833
zma-u.5
for
103629356
zma-u.5
for
100192779
ath-u.5
for
DRT112
ath-u.5
for
PETE1
gma-u.5
for
100306554
gma-u.5
for
100499708
sly-u.5
for
PETE
vvi-u.5
for
100248911
ppo-u.5
for
7485623
ppo-u.5
for
7496895
mtr-u.5
for
11426844


Ortholog ID: 5889
Species tae tae hvu bdi osa zma zma sbi ath ath gma gma sly vvi ppo ppo mtr ghi ghi bna sot cit nta nta cre
Symbol LOC123088670 LOC123165221 LOC123411665 LOC100827604 LOC4339833 LOC100192779 LOC103629356 LOC8066782 PETE1 DRT112 LOC100306554 LOC100499708 PETE LOC100248911 LOC7485623 LOC7496895 LOC11426844 LOC107937574 LOC121229431 LOC106440742 LOC102583807 LOC102622651 LOC107792758 LOC107812786 CHLRE_03g182551v5
Function* plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic-like Plastocyanin major isoform chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin 1 Cupredoxin superfamily protein plastocyanin putative plastocyanin plastocyanin, chloroplastic plastocyanin plastocyanin A, chloroplastic plastocyanin B, chloroplastic plastocyanin plastocyanin plastocyanin plastocyanin plastocyanin, chloroplastic plastocyanin plastocyanin plastocyanin A'/A'' uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 11
tae00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 11
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 5
hvu01200 Carbon metabolism 5
hvu00195 Photosynthesis 5
hvu00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 15
osa00190 Oxidative phosphorylation 2
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 8
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00195 Photosynthesis 5
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 12
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 11
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 14
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00710 Carbon fixation by Calvin cycle 7
nta01200 Carbon metabolism 7
nta00195 Photosynthesis 5
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 14
cre00195 Photosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123088670 123165221 123411665 100827604 4339833 100192779 103629356 8066782 843942 838622 100306554 100499708 544053 100248911 7485623 7496895 11426844 107937574 121229431 106440742 102583807 102622651 107792758 107812786 5728459
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