ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123092447	uncharacterized LOC123092447
osa-u.5	4332516	uncharacterized LOC4332516
zma-u.5	100382352	uncharacterized LOC100382352
ath-u.5	AT3G56010	uncharacterized protein
gma-u.5	100803254	uncharacterized LOC100803254
gma-u.5	100802755	uncharacterized LOC100802755
sly-u.5	101259619	uncharacterized LOC101259619
vvi-u.5	100255332	uncharacterized LOC100255332
ppo-u.5	7474421	uncharacterized LOC7474421
mtr-u.5	11406144	uncharacterized LOC11406144

functional annotation

KEGG

GO BP

GO CC

GO:0009535 [list] [network] chloroplast thylakoid membrane

(303 genes)

IEA

GO MF

Protein

XP_044370163.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, mito 1, plas 1, cyto_nucl 1, cysk_nucl 1, mito_plas 1

(predict for XP_044370163.1)

Subcellular
localization
TargetP

chlo 7, mito 3

(predict for XP_044370163.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123092447	osa-u.5 for 4332516	zma-u.5 for 100382352	ath-u.5 for AT3G56010	gma-u.5 for 100803254	gma-u.5 for 100802755	sly-u.5 for 101259619	vvi-u.5 for 100255332	ppo-u.5 for 7474421	mtr-u.5 for 11406144

Ortholog ID: 8509

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123085583

uncharacterized LOC123097771

uncharacterized LOC123448902

uncharacterized LOC104581802

uncharacterized LOC4332516

uncharacterized LOC100382352

translation initiation factor IF-2

uncharacterized protein

uncharacterized LOC100803254

uncharacterized LOC100802755

uncharacterized LOC101259619

uncharacterized LOC103863124

uncharacterized LOC100255332

uncharacterized LOC7474421

uncharacterized LOC11406144

uncharacterized LOC107957302

uncharacterized LOC107955191

uncharacterized LOC106445326

uncharacterized LOC106368118

uncharacterized LOC102605110

hypothetical protein

uncharacterized LOC107780363

uncharacterized LOC107762811

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	5
osa00710	Carbon fixation by Calvin cycle	4
osa00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	7
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3
sbi00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma00010	Glycolysis / Gluconeogenesis	2
gma00051	Fructose and mannose metabolism	2
gma00562	Inositol phosphate metabolism	2
gma00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2
bra00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00860	Porphyrin metabolism	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	2
sot00710	Carbon fixation by Calvin cycle	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

123085583

123097771

123448902

104581802

4332516

100382352

8084716

824767

100803254

100802755

101259619

103863124

100255332

7474421

11406144

107957302

107955191

106445326

106368118

102605110

102624918

107780363

107762811

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123092447 (tae-r.2 coexpression data)

Top 50 enrichment test to 123092447 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	cit	bra	ghi	sbi	bdi	nta	bna	cre	sot
Paralog	1	1	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123092447 (tae-r.2 coexpression data)

Top 50 enrichment test to 123092447 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**