Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123093852   pentatricopeptide repeat-containing protein At3g53170 
 tae-r.2   123106027   pentatricopeptide repeat-containing protein At3g53170 
 tae-r.2   123167620   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 tae-r.2   123160420   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 hvu-r.1   123449933   pentatricopeptide repeat-containing protein At3g53170 
 hvu-r.1   123412107   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 bdi-r.1   100841110   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 bdi-r.1   100822407   pentatricopeptide repeat-containing protein At3g53170 
 osa-u.5   4331394   pentatricopeptide repeat-containing protein At3g53170 
 osa-u.5   4340271   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 zma-u.5   103630811   pentatricopeptide repeat-containing protein At3g53170 
 zma-u.5   103630024   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 sbi-r.1   8076163   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 sbi-r.1   8059483   pentatricopeptide repeat-containing protein At3g53170 
 ath-u.5   AT3G53170   LOW protein: PPR containing protein 
 ath-u.5   AT5G48730   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100782157   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 gma-u.5   100810625   pentatricopeptide repeat-containing protein At3g53170 
 sly-u.5   101256511   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 sly-u.5   101244690   pentatricopeptide repeat-containing protein 
 bra-r.6   103841240   pentatricopeptide repeat-containing protein At3g53170 
 bra-r.6   103874985   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 vvi-u.5   100241357   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 vvi-u.5   100251669   pentatricopeptide repeat-containing protein At3g53170 
 ppo-u.5   7471146   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 mtr-u.5   25498349   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 mtr-u.5   25482614   pentatricopeptide repeat-containing protein At5g39710 
 mtr-u.5   11410820   pentatricopeptide repeat-containing protein At3g53170 
 ghi-r.1   107950686   pentatricopeptide repeat-containing protein At3g53170 
 ghi-r.1   107924644   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 ghi-r.1   107915832   pentatricopeptide repeat-containing protein At3g53170 
 bna-r.1   106382586   pentatricopeptide repeat-containing protein At3g53170 
 bna-r.1   106349013   pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like 
 bna-r.1   106348904   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 sot-r.1   102594466   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 sot-r.1   102579509   pentatricopeptide repeat-containing protein At3g53170 
 cit-r.1   102613671   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 
 cit-r.1   102628114   pentatricopeptide repeat-containing protein At3g53170 
 nta-r.1   107809437   pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like 
 nta-r.1   107802251   pentatricopeptide repeat-containing protein At3g53170 
 nta-r.1   107800243   pentatricopeptide repeat-containing protein At5g48730, chloroplastic 

close


Top 50 coexpressed genes to 123093852 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123093852 (tae-r.2 coexpression data)

CoexMap"123093852"


taeLOC123093852 | Entrez gene ID : 123093852    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 2 2 2 2 2 2 2 2 1 3 3 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044371841.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_044371841.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_044371841.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123093852
tae-r.2
for
123106027
tae-r.2
for
123167620
tae-r.2
for
123160420
hvu-r.1
for
123449933
hvu-r.1
for
123412107
bdi-r.1
for
100841110
bdi-r.1
for
100822407
osa-u.5
for
4331394
osa-u.5
for
4340271
zma-u.5
for
103630811
zma-u.5
for
103630024
sbi-r.1
for
8076163
sbi-r.1
for
8059483
ath-u.5
for
AT3G53170
ath-u.5
for
AT5G48730
gma-u.5
for
100782157
gma-u.5
for
100810625
sly-u.5
for
101256511
sly-u.5
for
101244690
bra-r.6
for
103841240
bra-r.6
for
103874985
vvi-u.5
for
100241357
vvi-u.5
for
100251669
ppo-u.5
for
7471146
mtr-u.5
for
25498349
mtr-u.5
for
25482614
mtr-u.5
for
11410820
ghi-r.1
for
107950686
ghi-r.1
for
107924644
ghi-r.1
for
107915832
bna-r.1
for
106382586
bna-r.1
for
106349013
bna-r.1
for
106348904
sot-r.1
for
102594466
sot-r.1
for
102579509
cit-r.1
for
102613671
cit-r.1
for
102628114
nta-r.1
for
107809437
nta-r.1
for
107802251
nta-r.1
for
107800243


Ortholog ID: 3818
Species tae tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath gma gma sly sly bra bra vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC123093852 LOC123160420 LOC123151946 LOC123449933 LOC123412107 LOC100841110 LOC100822407 LOC4331394 LOC4340271 LOC103630811 LOC103630024 LOC8076163 LOC8059483 AT3G53170 AT5G48730 LOC100782157 LOC100810625 LOC101256511 LOC101244690 LOC103841240 LOC103874985 LOC100241357 LOC100251669 LOC7471146 LOC25498349 LOC25482614 LOC11410820 LOC107950686 LOC107915832 LOC107912561 LOC106349013 LOC106348904 LOC106367790 LOC102594466 LOC102579509 LOC102613671 LOC102628114 LOC107809437 LOC107802251 LOC107786284
Function* pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 LOW protein: PPR containing protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like pentatricopeptide repeat-containing protein At3g53170 pentatricopeptide repeat-containing protein At3g53170
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bra01230 Biosynthesis of amino acids 5
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123093852 123160420 123151946 123449933 123412107 100841110 100822407 4331394 4340271 103630811 103630024 8076163 8059483 824483 834931 100782157 100810625 101256511 101244690 103841240 103874985 100241357 100251669 7471146 25498349 25482614 11410820 107950686 107915832 107912561 106349013 106348904 106367790 102594466 102579509 102613671 102628114 107809437 107802251 107786284
The preparation time of this page was 0.3 [sec].