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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123099105   transcription factor bHLH168 
 tae-r.2   123068153   transcription factor bHLH168 
 hvu-r.1   123449962   transcription factor bHLH168-like 
 osa-u.5   4326163   transcription factor bHLH168 
 osa-u.5   4326162   transcription factor bHLH168 
 zma-u.5   100272488   uncharacterized LOC100272488 
 ath-u.5   AT4G20970   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G10585   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100811485   transcription factor bHLH162 
 sly-u.5   101247399   transcription factor bHLH162 
 sly-u.5   101248286   transcription factor bHLH162-like 
 vvi-u.5   100853634   transcription factor bHLH167 
 ppo-u.5   7453762   transcription factor bHLH162 
 ghi-r.1   107951333   transcription factor bHLH162 
 ghi-r.1   107887184   transcription factor bHLH162 
 sot-r.1   102588456   uncharacterized LOC102588456 
 cit-r.1   102607218   transcription factor bHLH162-like 
 cit-r.1   112497282   transcription factor bHLH167-like 

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Top 50 coexpressed genes to 123099105 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123099105 (tae-r.2 coexpression data)

CoexMap"123099105"


taeLOC123099105 | Entrez gene ID : 123099105    
Species tae hvu osa zma ath gma sly vvi ppo ghi sot cit bra cre sbi nta mtr bna bdi
Paralog 2 1 2 1 2 1 2 1 1 2 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1094 genes)  IEA  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription regulator complex  (304 genes)  IEA  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (643 genes)  IEA  
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (700 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (2051 genes)  IEA  
Protein XP_044377182.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_044377182.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_044377182.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123099105
tae-r.2
for
123068153
hvu-r.1
for
123449962
osa-u.5
for
4326163
osa-u.5
for
4326162
zma-u.5
for
100272488
ath-u.5
for
AT4G20970
ath-u.5
for
AT1G10585
gma-u.5
for
100811485
sly-u.5
for
101247399
sly-u.5
for
101248286
vvi-u.5
for
100853634
ppo-u.5
for
7453762
ghi-r.1
for
107951333
ghi-r.1
for
107887184
sot-r.1
for
102588456
cit-r.1
for
102607218
cit-r.1
for
112497282


Ortholog ID: 394
Species tae tae hvu hvu bdi osa osa zma sbi ath ath gma sly sly bra vvi ppo ppo ghi ghi bna sot cit cit
Symbol LOC123106062 LOC123106064 LOC123449962 LOC123442337 LOC100832319 LOC4326163 LOC4326162 LOC100272488 LOC8070469 AT4G20970 AT1G10585 LOC100787505 LOC101247399 LOC101248286 LOC103858529 LOC100243748 LOC7453762 LOC18104618 LOC107887184 LOC107898967 LOC106373694 LOC102588456 LOC102607218 LOC102624080
Function* transcription factor bHLH167 transcription factor bHLH167 transcription factor bHLH168-like transcription factor bHLH168-like transcription factor bHLH168 transcription factor bHLH168 transcription factor bHLH168 uncharacterized LOC100272488 transcription factor bHLH168 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein uncharacterized LOC100787505 transcription factor bHLH162 transcription factor bHLH162-like transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162-like uncharacterized LOC102588456 transcription factor bHLH162-like transcription factor bHLH162
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 5
tae00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00053 Ascorbate and aldarate metabolism 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
hvu00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 4
ath00360 Phenylalanine metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123106062 123106064 123449962 123442337 100832319 4326163 4326162 100272488 8070469 827844 837600 100787505 101247399 101248286 103858529 100243748 7453762 18104618 107887184 107898967 106373694 102588456 102607218 102624080
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