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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123102450  pentatricopeptide repeat-containing protein At3g29230 
 osa-u.5  9270050  pentatricopeptide repeat-containing protein At3g29230 
 zma-u.5  100216817  uncharacterized LOC100216817 
 ath-u.5  AT3G29230  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100797216  pentatricopeptide repeat-containing protein At3g29230 
 gma-u.5  100782677  pentatricopeptide repeat-containing protein At3g29230 
 sly-u.5  101268821  pentatricopeptide repeat-containing protein At3g29230 
 vvi-u.5  100247571  pentatricopeptide repeat-containing protein At3g29230 
 ppo-u.5  112323215  pentatricopeptide repeat-containing protein At3g29230 
 mtr-u.5  11418425  pentatricopeptide repeat-containing protein At3g29230 

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Top 50 coexpressed genes to 123102450 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123102450 (tae-r.2 coexpression data)

CoexMap"123102450"


taeLOC123102450 | Entrez gene ID : 123102450
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044379731.1 [sequence] [blastp]
XP_044379732.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  E.R. 1  (predict for XP_044379731.1)
chlo 6,  mito 2,  E.R. 1  (predict for XP_044379732.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044379731.1)
mito 7  (predict for XP_044379732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123102450


osa-u.5
for
9270050


zma-u.5
for
100216817


ath-u.5
for
AT3G29230


gma-u.5
for
100797216


gma-u.5
for
100782677


sly-u.5
for
101268821


vvi-u.5
for
100247571


ppo-u.5
for
112323215


mtr-u.5
for
11418425



Ortholog ID: 9518
Species tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123119650 LOC123110625 LOC123398135 LOC100833125 LOC9270050 LOC100216817 LOC8060560 AT3G29230 LOC100797216 LOC100782677 LOC101268821 LOC103875093 LOC100247571 LOC112323215 LOC11418425 LOC107897375 LOC121229611 LOC106349126 LOC106411085 LOC102598877 LOC102623266 LOC107782710 LOC107811398
Function* pentatricopeptide repeat-containing protein At3g29230-like pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 uncharacterized LOC100216817 pentatricopeptide repeat-containing protein At3g29230 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123119650 123110625 123398135 100833125 9270050 100216817 8060560 822578 100797216 100782677 101268821 103875093 100247571 112323215 11418425 107897375 121229611 106349126 106411085 102598877 102623266 107782710 107811398
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