ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123105989	uncharacterized LOC123105989
tae-r.2	123093809	uncharacterized LOC123093809
tae-r.2	123099041	uncharacterized LOC123099041
hvu-r.1	123449906	uncharacterized LOC123449906
bdi-r.1	100845936	uncharacterized LOC100845936
osa-u.5	4331420	uncharacterized LOC4331420
zma-u.5	103630932	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
sbi-r.1	8057545	uncharacterized LOC8057545
ath-u.5	AT5G51880	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
gma-u.5	100526938	uncharacterized LOC100526938
sly-u.5	101266392	uncharacterized LOC101266392
bra-r.6	103832702	uncharacterized LOC103832702
vvi-u.5	100262964	uncharacterized LOC100262964
ppo-u.5	7454465	uncharacterized LOC7454465
mtr-u.5	11422845	uncharacterized LOC11422845
ghi-r.1	107930272	uncharacterized LOC107930272
ghi-r.1	107918597	uncharacterized LOC107918597
ghi-r.1	107894005	uncharacterized LOC107894005
bna-r.1	BNAC09G52920D	uncharacterized BNAC09G52920D
bna-r.1	125575155	uncharacterized LOC125575155
sot-r.1	102586781	uncharacterized LOC102586781
cit-r.1	102610224	uncharacterized LOC102610224
nta-r.1	107762755	uncharacterized LOC107762755
nta-r.1	107784461	uncharacterized LOC107784461
cre-r.1	CHLRE_14g619900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline

(32 genes)

IEA

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(1516 genes)

IEA

GO MF

GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity	(32 genes)	IEA
GO:0031418 [list] [network] L-ascorbic acid binding	(37 genes)	IEA
GO:0005506 [list] [network] iron ion binding	(1670 genes)	IEA

Protein

XP_044384115.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, cyto 2, plas 1, chlo_mito 1

(predict for XP_044384115.1)

Subcellular
localization
TargetP

other 7

(predict for XP_044384115.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123105989	tae-r.2 for 123093809	tae-r.2 for 123099041	hvu-r.1 for 123449906	bdi-r.1 for 100845936	osa-u.5 for 4331420	zma-u.5 for 103630932	sbi-r.1 for 8057545	ath-u.5 for AT5G51880	gma-u.5 for 100526938	sly-u.5 for 101266392	bra-r.6 for 103832702	vvi-u.5 for 100262964	ppo-u.5 for 7454465	mtr-u.5 for 11422845	ghi-r.1 for 107930272	ghi-r.1 for 107918597	ghi-r.1 for 107894005	bna-r.1 for BNAC09G52920D	bna-r.1 for 125575155	sot-r.1 for 102586781	cit-r.1 for 102610224	nta-r.1 for 107762755	nta-r.1 for 107784461	cre-r.1 for CHLRE_14g619900v5

Ortholog

Ortholog ID: 9733

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123105989

uncharacterized LOC123093809

uncharacterized LOC123099041

uncharacterized LOC123449906

uncharacterized LOC100845936

uncharacterized LOC4331420

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

uncharacterized LOC8057545

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

uncharacterized LOC100526938

uncharacterized LOC101266392

uncharacterized LOC103832702

uncharacterized LOC100262964

uncharacterized LOC7454465

uncharacterized LOC11422845

uncharacterized LOC107930272

uncharacterized LOC107918597

uncharacterized LOC107894005

uncharacterized BNAC09G52920D

uncharacterized LOC125575155

uncharacterized LOC102586781

uncharacterized LOC102610224

uncharacterized LOC107762755

uncharacterized LOC107784461

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	6
tae04146	Peroxisome	3
tae03040	Spliceosome	2
tae03083	Polycomb repressive complex	2
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	6
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	3
tae00750	Vitamin B6 metabolism	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	3
osa03420	Nucleotide excision repair	3
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma03010	Ribosome	2
zma04145	Phagosome	2
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	6
ath03050	Proteasome	3
ath04120	Ubiquitin mediated proteolysis	3
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	3
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	2
bra00190	Oxidative phosphorylation	2
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	14
ppo04145	Phagosome	3
ppo00190	Oxidative phosphorylation	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01232	Nucleotide metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

123105989

123093809

123099041

123449906

100845936

4331420

103630932

8057545

835263

100526938

101266392

103832702

100262964

7454465

11422845

107930272

107918597

107894005

106423698

125575155

102586781

102610224

107762755

107784461

5715880

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123105989 (tae-r.2 coexpression data)

Top 50 enrichment test to 123105989 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	1	1	1	1	1	1	1	1	1	3	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123105989 (tae-r.2 coexpression data)

Top 50 enrichment test to 123105989 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**