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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123110955  SAGA-associated factor 29 homolog A 
 tae-r.2  123102900  SAGA-associated factor 29 homolog A 
 tae-r.2  123119958  SAGA-associated factor 29 homolog A 
 hvu-r.1  123395421  SAGA-associated factor 29 homolog A-like 
 bdi-r.1  100836901  SAGA-associated factor 29 homolog A 
 osa-u.5  4352010  SAGA-associated factor 29 homolog A 
 zma-u.5  100273149  uncharacterized LOC100273149 
 sbi-r.1  8086164  SAGA-associated factor 29 
 ath-u.5  SGF29a  SGF29 tudor-like domain-containing protein 
 ath-u.5  SGF29b  SGF29 tudor-like domain-containing protein 
 gma-u.5  100807100  SAGA-associated factor 29 homolog B 
 gma-u.5  100526864  SAGA-associated factor 29 homolog A 
 sly-u.5  101259099  SAGA-associated factor 29 homolog A 
 bra-r.6  103875218  SAGA-associated factor 29 homolog A 
 bra-r.6  103854231  SAGA-associated factor 29 homolog A-like 
 vvi-u.5  100250716  SAGA-associated factor 29 homolog A 
 ppo-u.5  7487883  SAGA-associated factor 29 homolog A 
 mtr-u.5  25497895  SAGA-associated factor 29 homolog B 
 mtr-u.5  25497898  SAGA-associated factor 29 homolog B 
 ghi-r.1  107926397  SAGA-associated factor 29 homolog A 
 ghi-r.1  107926383  SAGA-associated factor 29 homolog A 
 ghi-r.1  107926049  SAGA-associated factor 29 homolog A 
 bna-r.1  111198743  SAGA-associated factor 29 homolog A 
 bna-r.1  125580447  SAGA-associated factor 29 homolog A-like 
 bna-r.1  BNAA06G32090D  SAGA-associated factor 29 homolog A 
 sot-r.1  102584443  SAGA-associated factor 29 homolog 
 cit-r.1  102610957  SAGA-associated factor 29 homolog A 
 nta-r.1  107768043  SAGA-associated factor 29 homolog A 
 nta-r.1  107797557  SAGA-associated factor 29 homolog A 
 nta-r.1  107801823  SAGA-associated factor 29 homolog A-like 

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Top 50 coexpressed genes to 123110955 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123110955 (tae-r.2 coexpression data)

CoexMap"123110955"


taeLOC123110955 | Entrez gene ID : 123110955
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 2 2 1 2 1 1 2 3 3 1 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000124 [list] [network] SAGA complex  (69 genes)  IEA  
GO MF
Protein XP_044387545.1 [sequence] [blastp]
XP_044387546.1 [sequence] [blastp]
XP_044387547.1 [sequence] [blastp]
XP_044387548.1 [sequence] [blastp]
XP_044387549.1 [sequence] [blastp]
XP_044387550.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  pero 2,  cyto 1,  chlo 1,  golg 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044387545.1)
nucl 4,  cyto 3,  pero 1,  cyto_E.R. 1  (predict for XP_044387546.1)
nucl 4,  cyto 2,  pero 2,  cyto_pero 2  (predict for XP_044387547.1)
nucl 7,  cyto 2  (predict for XP_044387548.1)
nucl 4,  cyto 3,  pero 1,  cyto_E.R. 1  (predict for XP_044387549.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_044387550.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044387545.1)
other 8  (predict for XP_044387546.1)
other 8  (predict for XP_044387547.1)
other 8  (predict for XP_044387548.1)
other 8  (predict for XP_044387549.1)
other 8  (predict for XP_044387550.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123110955


tae-r.2
for
123102900


tae-r.2
for
123119958


hvu-r.1
for
123395421


bdi-r.1
for
100836901


osa-u.5
for
4352010


zma-u.5
for
100273149


sbi-r.1
for
8086164


ath-u.5
for
SGF29a


ath-u.5
for
SGF29b


gma-u.5
for
100807100


gma-u.5
for
100526864


sly-u.5
for
101259099


bra-r.6
for
103875218


bra-r.6
for
103854231


vvi-u.5
for
100250716


ppo-u.5
for
7487883


mtr-u.5
for
25497895


mtr-u.5
for
25497898


ghi-r.1
for
107926397


ghi-r.1
for
107926383


ghi-r.1
for
107926049


bna-r.1
for
111198743


bna-r.1
for
125580447


bna-r.1
for
BNAA06G32090D


sot-r.1
for
102584443


cit-r.1
for
102610957


nta-r.1
for
107768043


nta-r.1
for
107797557


nta-r.1
for
107801823



Ortholog ID: 6007
Species tae tae tae hvu bdi osa zma sbi ath ath gma gma sly bra bra vvi ppo mtr mtr ghi ghi ghi bna bna bna sot cit nta nta nta
Symbol LOC123110955 LOC123102900 LOC123119958 LOC123395421 LOC100836901 LOC4352010 LOC100273149 LOC8086164 SGF29a SGF29b LOC100807100 LOC100526864 LOC101259099 LOC103875218 LOC103854231 LOC100250716 LOC7487883 LOC25497895 LOC25497898 LOC107926049 LOC107922987 LOC107897901 LOC111198743 LOC125580447 LOC106424678 LOC102584443 LOC102610957 LOC107768043 LOC107797557 LOC107801823
Function* SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A-like SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A uncharacterized LOC100273149 SAGA-associated factor 29 SGF29 tudor-like domain-containing protein SGF29 tudor-like domain-containing protein SAGA-associated factor 29 homolog B SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A-like SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog B SAGA-associated factor 29 homolog B SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A-like SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A SAGA-associated factor 29 homolog A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00562 Inositol phosphate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03008 Ribosome biogenesis in eukaryotes 3
bra03250 Viral life cycle - HIV-1 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 4
ghi03272 Virion - Hepatitis viruses 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
bna04070 Phosphatidylinositol signaling system 6
bna04075 Plant hormone signal transduction 6
bna04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123110955 123102900 123119958 123395421 100836901 4352010 100273149 8086164 822367 834053 100807100 100526864 101259099 103875218 103854231 100250716 7487883 25497895 25497898 107926049 107922987 107897901 111198743 125580447 106424678 102584443 102610957 107768043 107797557 107801823
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