ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123112258	cyclin-D4-1
osa-u.5	4331985	cyclin-D5-3-like
osa-u.5	4333455	cyclin-D5-1-like
zma-u.5	100283450	cyclin delta-2
zma-u.5	100283538	cyclin delta-2
zma-u.5	100501413	Cyclin-D5-1
ath-u.5	CYCD2;1	Cyclin D2;1
ath-u.5	CYCD1;1	CYCLIN D1;1
ath-u.5	CYCD3;2	CYCLIN D3;2
gma-u.5	100799683	cyclin-D4-1
gma-u.5	100795892	cyclin-D3-3
sly-u.5	cycd3c3	D-type cyclin-3
sly-u.5	101263411	cyclin-D1-1
vvi-u.5	100854424	cyclin-D5-1
vvi-u.5	100267897	cyclin-D3-3
ppo-u.5	7471482	cyclin-D1-1
ppo-u.5	7472682	cyclin-D3-1
mtr-u.5	11446144	cyclin-D4-2
mtr-u.5	11405645	cyclin-D1-1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044389141.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_044389141.1)

Subcellular
localization
TargetP

other 6, scret 5

(predict for XP_044389141.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123112258	osa-u.5 for 4331985	osa-u.5 for 4333455	zma-u.5 for 100283450	zma-u.5 for 100283538	zma-u.5 for 100501413	ath-u.5 for CYCD2;1	ath-u.5 for CYCD1;1	ath-u.5 for CYCD3;2	gma-u.5 for 100799683	gma-u.5 for 100795892	sly-u.5 for cycd3c3	sly-u.5 for 101263411	vvi-u.5 for 100854424	vvi-u.5 for 100267897	ppo-u.5 for 7471482	ppo-u.5 for 7472682	mtr-u.5 for 11446144	mtr-u.5 for 11405645

Ortholog

Ortholog ID: 67

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CYCD4;1

CYCD1;1

Function^*

cyclin-D2-2

cyclin-D5-1-like

cyclin-D4-1-like

cyclin-D5-3

cyclin-D4-2

cyclin-D3-1-like

uncharacterized LOC100273934

cyclin-D4-1

cyclin-D3-1

CYCLIN D4;1

CYCLIN D1;1

cyclin-D3-1-like

cyclin-D3-3

cyclin-D2-1

cyclin-D3-2

cyclin-D5-1

cyclin-D4-2

cyclin-D1-1

cyclin-D3-1

cyclin-D5-1

cyclin-D4-2

cyclin-D3-3

cyclin-D4-1-like

cyclin-D3-3

cyclin-D3-3-like

cyclin-D5-1

cyclin-D4-1-like

cyclin-D3-2

cyclin-D4-1-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi03030	DNA replication	5
sbi04145	Phagosome	3
sbi03060	Protein export	3
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	6
ath03420	Nucleotide excision repair	3
ath03430	Mismatch repair	3
ath03440	Homologous recombination	3
ath03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2
gma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	2
bra00500	Starch and sucrose metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00944	Flavone and flavonol biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03030	DNA replication	7
bna00270	Cysteine and methionine metabolism	2
bna03410	Base excision repair	2
bna03420	Nucleotide excision repair	2
bna03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	7
sot04075	Plant hormone signal transduction	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	5
nta04145	Phagosome	4
nta04517	IgSF CAM signaling	4
nta04814	Motor proteins	4
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	3
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta01240	Biosynthesis of cofactors	3
nta01250	Biosynthesis of nucleotide sugars	3
nta00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3

Expression

Expression pattern

Entrez Gene ID^*

123052052

123451148

123398931

100832008

100841255

4340499

100273934

103647502

8078902

836667

843357

100804102

100807175

101248769

103829523

103862565

100247298

100255261

18104838

7490056

11433995

107899915

107932943

106417667

106402828

102583812

102606606

102630732

107782163

107776537

5725073

5720978

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123112258 (tae-r.2 coexpression data)

Top 50 enrichment test to 123112258 (tae-r.2 coexpression data)


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	2	3	3	2	2	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123112258 (tae-r.2 coexpression data)

Top 50 enrichment test to 123112258 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**