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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123127634   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 tae-r.2   123051626   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 tae-r.2   123181597   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 hvu-r.1   123438230   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 bdi-r.1   100836786   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 osa-u.5   4349304   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like 
 sbi-r.1   8058119   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 
 ath-u.5   MURE   ALBINO OR PALE-GREEN 13 
 gma-u.5   121174912   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 gma-u.5   100776096   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 gma-u.5   100776022   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 sly-u.5   101055537   Hop-interacting protein THI138 
 bra-r.6   103838259   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 vvi-u.5   100242838   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 ppo-u.5   7479309   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 mtr-u.5   25502053   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 ghi-r.1   107931944   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 ghi-r.1   107929288   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 ghi-r.1   107963782   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 bna-r.1   106390268   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like 
 bna-r.1   106450712   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 sot-r.1   102596510   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 
 cit-r.1   102630045   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 nta-r.1   107825868   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like 
 nta-r.1   107778530   UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 
 cre-r.1   CHLRE_12g519900v5   uncharacterized protein 

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Top 50 coexpressed genes to 123127634 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123127634 (tae-r.2 coexpression data)

CoexMap"123127634"


taeLOC123127634 | Entrez gene ID : 123127634    
Species tae hvu bdi osa sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre zma
Paralog 3 1 1 1 1 1 3 1 1 1 1 1 3 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008360 [list] [network] regulation of cell shape  (8 genes)  IEA  
GO:0051301 [list] [network] cell division  (79 genes)  IEA  
GO:0009058 [list] [network] biosynthetic process  (9135 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0016881 [list] [network] acid-amino acid ligase activity  (69 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
Protein XP_044403330.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044403330.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044403330.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123127634
tae-r.2
for
123051626
tae-r.2
for
123181597
hvu-r.1
for
123438230
bdi-r.1
for
100836786
osa-u.5
for
4349304
sbi-r.1
for
8058119
ath-u.5
for
MURE
gma-u.5
for
121174912
gma-u.5
for
100776096
gma-u.5
for
100776022
sly-u.5
for
101055537
bra-r.6
for
103838259
vvi-u.5
for
100242838
ppo-u.5
for
7479309
mtr-u.5
for
25502053
ghi-r.1
for
107931944
ghi-r.1
for
107929288
ghi-r.1
for
107963782
bna-r.1
for
106390268
bna-r.1
for
106450712
sot-r.1
for
102596510
cit-r.1
for
102630045
nta-r.1
for
107825868
nta-r.1
for
107778530
cre-r.1
for
CHLRE_12g519900v5


Ortholog ID: 8752
Species tae tae tae hvu bdi osa sbi ath gma gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC123127634 LOC123051626 LOC123181597 LOC123438230 LOC100836786 LOC4349304 LOC8058119 MURE LOC121174912 LOC100776096 LOC100776022 LOC101055537 LOC103838259 LOC100242838 LOC7479309 LOC25502053 LOC107931944 LOC107963782 LOC107944628 LOC106390268 LOC106450712 LOC102596510 LOC102630045 LOC107825868 LOC107778530 CHLRE_12g519900v5
Function* UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase ALBINO OR PALE-GREEN 13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic Hop-interacting protein THI138 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic-like UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123127634 123051626 123181597 123438230 100836786 4349304 8058119 842672 121174912 100776096 100776022 101055537 103838259 100242838 7479309 25502053 107931944 107963782 107944628 106390268 106450712 102596510 102630045 107825868 107778530 5722604
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