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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123127718   probable trehalose-phosphate phosphatase 2 
 tae-r.2   123127938   probable trehalose-phosphate phosphatase 1 
 tae-r.2   123137693   probable trehalose-phosphate phosphatase 1 
 tae-r.2   123051747   probable trehalose-phosphate phosphatase 2 
 hvu-r.1   123438401   probable trehalose-phosphate phosphatase 2 
 hvu-r.1   123404368   probable trehalose-phosphate phosphatase 1 
 bdi-r.1   100826238   probable trehalose-phosphate phosphatase 1 
 bdi-r.1   100839839   probable trehalose-phosphate phosphatase 2 
 osa-u.5   4349333   probable trehalose-phosphate phosphatase 2 
 osa-u.5   4330221   probable trehalose-phosphate phosphatase 1 
 zma-u.5   100285860   trehalose-phosphate phosphatase 
 zma-u.5   100216724   uncharacterized LOC100216724 
 sbi-r.1   8058110   probable trehalose-phosphate phosphatase 2 
 sbi-r.1   110434966   probable trehalose-phosphate phosphatase 1 
 ath-u.5   TPPF   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 ath-u.5   TPPG   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 ath-u.5   ATTPPA   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 gma-u.5   100775207   trehalose-phosphate phosphatase A 
 gma-u.5   100783008   trehalose-phosphate phosphatase A 
 gma-u.5   100819495   trehalose-phosphate phosphatase A 
 sly-u.5   101247646   probable trehalose-phosphate phosphatase F 
 sly-u.5   101255111   probable trehalose-phosphate phosphatase F 
 sly-u.5   101246803   trehalose-phosphate phosphatase A 
 bra-r.6   103833085   trehalose-phosphate phosphatase A 
 bra-r.6   103860163   probable trehalose-phosphate phosphatase G 
 bra-r.6   103861317   probable trehalose-phosphate phosphatase G 
 vvi-u.5   100254004   probable trehalose-phosphate phosphatase F 
 vvi-u.5   100251837   uncharacterized LOC100251837 
 ppo-u.5   7453982   trehalose-phosphate phosphatase A 
 ppo-u.5   7465524   probable trehalose-phosphate phosphatase F 
 ppo-u.5   18093987   probable trehalose-phosphate phosphatase F 
 mtr-u.5   11407921   probable trehalose-phosphate phosphatase G 
 mtr-u.5   11410522   probable trehalose-phosphate phosphatase F 
 mtr-u.5   25491860   trehalose-phosphate phosphatase A 
 ghi-r.1   107943939   probable trehalose-phosphate phosphatase F 
 ghi-r.1   107946851   trehalose-phosphate phosphatase A 
 bna-r.1   106415615   trehalose-phosphate phosphatase A 
 bna-r.1   106406793   trehalose-phosphate phosphatase A 
 bna-r.1   111198494   trehalose-phosphate phosphatase A 
 sot-r.1   102580647   probable trehalose-phosphate phosphatase F 
 sot-r.1   102602255   trehalose-phosphate phosphatase A 
 cit-r.1   102620821   probable trehalose-phosphate phosphatase F 
 cit-r.1   102628590   trehalose-phosphate phosphatase A 
 nta-r.1   107778255   putative trehalose-phosphate phosphatase F 
 nta-r.1   107793256   putative trehalose-phosphate phosphatase F 
 nta-r.1   107814858   trehalose-phosphate phosphatase A-like 

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Top 50 coexpressed genes to 123127718 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123127718 (tae-r.2 coexpression data)

CoexMap"123127718"


taeLOC123127718 | Entrez gene ID : 123127718    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 2 2 2 3 3 3 3 2 3 3 2 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00500 [list] [network] Starch and sucrose metabolism (558 genes)
GO BP
GO:0005992 [list] [network] trehalose biosynthetic process  (54 genes)  IEA  
GO CC
GO MF
GO:0004805 [list] [network] trehalose-phosphatase activity  (54 genes)  IEA  
Protein XP_044403458.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  vacu 1  (predict for XP_044403458.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_044403458.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123127718
tae-r.2
for
123127938
tae-r.2
for
123137693
tae-r.2
for
123051747
hvu-r.1
for
123438401
hvu-r.1
for
123404368
bdi-r.1
for
100826238
bdi-r.1
for
100839839
osa-u.5
for
4349333
osa-u.5
for
4330221
zma-u.5
for
100285860
zma-u.5
for
100216724
sbi-r.1
for
8058110
sbi-r.1
for
110434966
ath-u.5
for
TPPF
ath-u.5
for
TPPG
ath-u.5
for
ATTPPA
gma-u.5
for
100775207
gma-u.5
for
100783008
gma-u.5
for
100819495
sly-u.5
for
101247646
sly-u.5
for
101255111
sly-u.5
for
101246803
bra-r.6
for
103833085
bra-r.6
for
103860163
bra-r.6
for
103861317
vvi-u.5
for
100254004
vvi-u.5
for
100251837
ppo-u.5
for
7453982
ppo-u.5
for
7465524
ppo-u.5
for
18093987
mtr-u.5
for
11407921
mtr-u.5
for
11410522
mtr-u.5
for
25491860
ghi-r.1
for
107943939
ghi-r.1
for
107946851
bna-r.1
for
106415615
bna-r.1
for
106406793
bna-r.1
for
111198494
sot-r.1
for
102580647
sot-r.1
for
102602255
cit-r.1
for
102620821
cit-r.1
for
102628590
nta-r.1
for
107778255
nta-r.1
for
107793256
nta-r.1
for
107814858


Ortholog ID: 1987
Species tae tae tae hvu hvu bdi bdi osa osa zma zma sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC123127938 LOC123145030 LOC123181612 LOC123438401 LOC123404368 LOC100826238 LOC100839839 LOC4349333 LOC4330221 LOC100285860 LOC100216724 LOC8058110 LOC110434966 TPPF TPPG ATTPPA LOC100775207 LOC100783008 LOC100819495 LOC101247646 LOC101255111 LOC101246803 LOC103860163 LOC103861317 LOC103852148 LOC100254004 LOC100251837 LOC7453982 LOC7465524 LOC18093987 LOC11407921 LOC11410522 LOC25491860 LOC107943939 LOC107933482 LOC107886093 LOC111198494 LOC111198004 LOC106376534 LOC102580647 LOC102602255 LOC102620821 LOC102628590 LOC107793256 LOC107814858 LOC107832745
Function* probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase 1 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 1 trehalose-phosphate phosphatase uncharacterized LOC100216724 probable trehalose-phosphate phosphatase 2 probable trehalose-phosphate phosphatase 1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase G probable trehalose-phosphate phosphatase G trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F uncharacterized LOC100251837 trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase F probable trehalose-phosphate phosphatase G probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase G probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A probable trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A putative trehalose-phosphate phosphatase F trehalose-phosphate phosphatase A-like putative trehalose-phosphate phosphatase F
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae04626 Plant-pathogen interaction 4
tae00500 Starch and sucrose metabolism 4
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00360 Phenylalanine metabolism 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 2
bdi01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa01230 Biosynthesis of amino acids 3
osa00020 Citrate cycle (TCA cycle) 3
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 2
zma00330 Arginine and proline metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
ath00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00480 Glutathione metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 10
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00360 Phenylalanine metabolism 3
bra00941 Flavonoid biosynthesis 3
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 5
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 2
vvi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 3
ppo00330 Arginine and proline metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04016 MAPK signaling pathway - plant 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00500 Starch and sucrose metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00561 Glycerolipid metabolism 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123127938 123145030 123181612 123438401 123404368 100826238 100839839 4349333 4330221 100285860 100216724 8058110 110434966 826855 828355 835220 100775207 100783008 100819495 101247646 101255111 101246803 103860163 103861317 103852148 100254004 100251837 7453982 7465524 18093987 11407921 11410522 25491860 107943939 107933482 107886093 111198494 111198004 106376534 102580647 102602255 102620821 102628590 107793256 107814858 107832745
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