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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4330009  pentatricopeptide repeat-containing protein At1g33350 
 zma-u.5  103627426  pentatricopeptide repeat-containing protein At1g33350 
 ath-u.5  AT1G33350  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100806937  pentatricopeptide repeat-containing protein At1g33350 
 vvi-u.5  100243058  pentatricopeptide repeat-containing protein At1g33350 
 mtr-u.5  11440689  pentatricopeptide repeat-containing protein At1g33350 

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Top 50 coexpressed genes to 4330009 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4330009 (osa-u.5 coexpression data)

CoexMap"123127752"


taeLOC123127752 | Entrez gene ID : 123127752
Species osa zma ath gma vvi mtr hvu bna sly cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044403510.1 [sequence] [blastp]
XP_044403511.1 [sequence] [blastp]
XP_044403512.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_044403510.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_044403511.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_044403512.1)
Subcellular
localization
TargetP
other 3  (predict for XP_044403510.1)
other 3  (predict for XP_044403511.1)
other 3  (predict for XP_044403512.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4330009


zma-u.5
for
103627426


ath-u.5
for
AT1G33350


gma-u.5
for
100806937


vvi-u.5
for
100243058


mtr-u.5
for
11440689



Ortholog ID: 12036
Species bdi osa zma sbi ath gma bra vvi mtr ghi ghi sot cit nta nta
Symbol LOC100833300 LOC4330009 LOC103627426 LOC8072486 AT1G33350 LOC100806937 LOC103840067 LOC100243058 LOC11440689 LOC107888653 LOC107892300 LOC102604700 LOC102630851 LOC107815748 LOC107816437
Function* pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350-like pentatricopeptide repeat-containing protein At1g33350-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100833300 4330009 103627426 8072486 840229 100806937 103840067 100243058 11440689 107888653 107892300 102604700 102630851 107815748 107816437
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