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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4340049   probable ribosome-binding factor A, chloroplastic 
 zma-u.5   100282982   uncharacterized LOC100282982 
 ath-u.5   AT4G34730   ribosome-binding factor A family protein 
 gma-u.5   100812407   probable ribosome-binding factor A, chloroplastic 
 sly-u.5   101268810   probable ribosome-binding factor A, chloroplastic 
 vvi-u.5   100267621   probable ribosome-binding factor A, chloroplastic 
 ppo-u.5   7477847   probable ribosome-binding factor A, chloroplastic 
 mtr-u.5   11428164   probable ribosome-binding factor A, chloroplastic 

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Top 50 coexpressed genes to 4340049 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4340049 (osa-u.5 coexpression data)

CoexMap"123129604"


taeLOC123129604 | Entrez gene ID : 123129604    
Species osa zma ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (599 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (792 genes)  IEA  
GO CC
GO MF
GO:0043024 [list] [network] ribosomal small subunit binding  (13 genes)  IEA  
Protein XP_044405641.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044405641.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044405641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4340049

.
zma-u.5
for
100282982

.
ath-u.5
for
AT4G34730

.
gma-u.5
for
100812407

.
sly-u.5
for
101268810

.
vvi-u.5
for
100267621

.
ppo-u.5
for
7477847

.
mtr-u.5
for
11428164

.


Ortholog ID: 8111
Species ath gma sly osa zma bra bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G34730 LOC100812407 LOC101268810 LOC4340049 LOC100282982 LOC103862372 LOC103834996 LOC100267621 LOC7477847 LOC11428164 LOC123087881 LOC123411008 LOC107920539 LOC107903713 LOC106428779 LOC106352754 CHLRE_02g145000v5 LOC8068416 LOC102599539 LOC102627982 LOC100833422 LOC107782153 LOC107766361
Function* ribosome-binding factor A family protein probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic uncharacterized LOC100282982 probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic uncharacterized protein probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic probable ribosome-binding factor A, chloroplastic putative ribosome-binding factor A, chloroplastic putative ribosome-binding factor A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly00860 Porphyrin metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04146 Peroxisome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04146 Peroxisome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829625 100812407 101268810 4340049 100282982 103862372 103834996 100267621 7477847 11428164 123087881 123411008 107920539 107903713 106428779 106352754 5720493 8068416 102599539 102627982 100833422 107782153 107766361
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