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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123135848   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 tae-r.2   123143371   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 tae-r.2   123131877   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 hvu-r.1   123401567   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 bdi-r.1   100835242   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 osa-u.5   4328130   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 zma-u.5   100281725   uncharacterized LOC100281725 
 sbi-r.1   8068265   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 ath-u.5   ARC6   Chaperone DnaJ-domain superfamily protein 
 gma-u.5   100790455   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 gma-u.5   100778956   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 sly-u.5   101055525   Hop-interacting protein THI044 
 bra-r.6   103828021   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 vvi-u.5   100251728   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 ppo-u.5   7493942   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 mtr-u.5   11417899   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 ghi-r.1   107941586   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 ghi-r.1   107905489   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 bna-r.1   111205182   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic-like 
 bna-r.1   106349524   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 sot-r.1   102585006   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 cit-r.1   102612149   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 nta-r.1   107788198   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic 
 cre-r.1   CHLRE_12g488500v5   uncharacterized protein 

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Top 50 coexpressed genes to 123135848 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123135848 (tae-r.2 coexpression data)

CoexMap"123135848"


taeLOC123135848 | Entrez gene ID : 123135848    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010020 [list] [network] chloroplast fission  (42 genes)  IEA  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (59 genes)  IEA  
GO MF
Protein XP_044411012.1 [sequence] [blastp]
XP_044411013.1 [sequence] [blastp]
XP_044411014.1 [sequence] [blastp]
XP_044411015.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044411012.1)
chlo 10  (predict for XP_044411013.1)
chlo 8,  nucl 1,  plas 1,  pero 1,  nucl_plas 1  (predict for XP_044411014.1)
chlo 8,  nucl 1,  plas 1,  pero 1,  nucl_plas 1  (predict for XP_044411015.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044411012.1)
chlo 8  (predict for XP_044411013.1)
chlo 8  (predict for XP_044411014.1)
chlo 8  (predict for XP_044411015.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123135848
tae-r.2
for
123143371
tae-r.2
for
123131877
hvu-r.1
for
123401567
bdi-r.1
for
100835242
osa-u.5
for
4328130
zma-u.5
for
100281725
sbi-r.1
for
8068265
ath-u.5
for
ARC6
gma-u.5
for
100790455
gma-u.5
for
100778956
sly-u.5
for
101055525
bra-r.6
for
103828021
vvi-u.5
for
100251728
ppo-u.5
for
7493942
mtr-u.5
for
11417899
ghi-r.1
for
107941586
ghi-r.1
for
107905489
bna-r.1
for
111205182
bna-r.1
for
106349524
sot-r.1
for
102585006
cit-r.1
for
102612149
nta-r.1
for
107788198
cre-r.1
for
CHLRE_12g488500v5


Ortholog ID: 10975
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta cre
Symbol LOC123135848 LOC123143371 LOC123131877 LOC123401567 LOC100835242 LOC4328130 LOC100281725 LOC8068265 ARC6 LOC100790455 LOC100778956 LOC101055525 LOC103828021 LOC100251728 LOC7493942 LOC11417899 LOC107941586 LOC107905489 LOC111205182 LOC106349524 LOC102585006 LOC102612149 LOC107788198 CHLRE_12g488500v5
Function* protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic uncharacterized LOC100281725 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic Chaperone DnaJ-domain superfamily protein protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic Hop-interacting protein THI044 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic-like protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00650 Butanoate metabolism 2
tae00660 C5-Branched dibasic acid metabolism 2
tae00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00290 Valine, leucine and isoleucine biosynthesis 3
osa01210 2-Oxocarboxylic acid metabolism 2
osa00260 Glycine, serine and threonine metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma00770 Pantothenate and CoA biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath01230 Biosynthesis of amino acids 3
ath00290 Valine, leucine and isoleucine biosynthesis 2
ath00620 Pyruvate metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma01200 Carbon metabolism 2
gma00061 Fatty acid biosynthesis 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi01240 Biosynthesis of cofactors 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 10
bna00030 Pentose phosphate pathway 4
bna01200 Carbon metabolism 4
bna00260 Glycine, serine and threonine metabolism 4
bna00750 Vitamin B6 metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 10
bna00030 Pentose phosphate pathway 4
bna01200 Carbon metabolism 4
bna00260 Glycine, serine and threonine metabolism 4
bna00750 Vitamin B6 metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123135848 123143371 123131877 123401567 100835242 4328130 100281725 8068265 834255 100790455 100778956 101055525 103828021 100251728 7493942 11417899 107941586 107905489 111205182 106349524 102585006 102612149 107788198 5716665
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