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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123143623   chloride channel protein CLC-b 
 osa-u.5   4352132   chloride channel protein CLC-b 
 zma-u.5   100502532   chloride channel protein 
 ath-u.5   CLC-B   chloride channel B 
 ath-u.5   CLC-A   chloride channel A 
 gma-u.5   CLC1   chloride channel 
 gma-u.5   100778395   chloride channel protein CLC-b 
 gma-u.5   100788620   chloride channel protein CLC-b 
 sly-u.5   101249604   chloride channel protein CLC-b 
 sly-u.5   101244821   chloride channel protein CLC-a-like 
 vvi-u.5   100260066   chloride channel ClC4 
 ppo-u.5   7456226   chloride channel protein CLC-b 
 mtr-u.5   11427694   chloride channel protein CLC-a 
 mtr-u.5   25497844   chloride channel protein CLC-b 

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Top 50 coexpressed genes to 123143623 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123143623 (tae-r.2 coexpression data)

CoexMap"123143623"


taeLOC123143623 | Entrez gene ID : 123143623    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 2 3 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006821 [list] [network] chloride transport  (38 genes)  IEA  
GO:0055085 [list] [network] transmembrane transport  (3218 genes)  IEA  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (67 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (15494 genes)  IEA  
GO MF
GO:0009671 [list] [network] nitrate:proton symporter activity  (6 genes)  IEA  
GO:0005247 [list] [network] voltage-gated chloride channel activity  (29 genes)  IEA  
Protein XP_044418495.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 1,  golg 1  (predict for XP_044418495.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_044418495.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123143623

.
osa-u.5
for
4352132

.
zma-u.5
for
100502532

.
ath-u.5
for
CLC-B

.
ath-u.5
for
CLC-A

.
gma-u.5
for
CLC1

.
gma-u.5
for
100778395

.
gma-u.5
for
100788620

.
sly-u.5
for
101249604

.
sly-u.5
for
101244821

.
vvi-u.5
for
100260066

.
ppo-u.5
for
7456226

.
mtr-u.5
for
11427694

.
mtr-u.5
for
25497844

.


Ortholog ID: 4393
Species ath ath gma gma sly sly osa zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol CLC-A CLC-B CLC1 LOC100788620 LOC101249604 LOC101244821 LOC4352132 LOC100502532 LOC103875243 LOC103864237 LOC100260066 LOC7456226 LOC11427694 LOC25497844 LOC123136113 LOC123136114 LOC123402053 LOC123403982 LOC107956992 LOC107899713 LOC106376961 LOC106405923 LOC8058450 LOC102601748 LOC102603214 LOC102628105 LOC100825238 LOC107777321 LOC107767514
Function* chloride channel A chloride channel B chloride channel chloride channel protein CLC-b chloride channel protein CLC-b chloride channel protein CLC-a-like chloride channel protein CLC-b chloride channel protein chloride channel protein CLC-b chloride channel protein CLC-a chloride channel ClC4 chloride channel protein CLC-b chloride channel protein CLC-a chloride channel protein CLC-b chloride channel protein CLC-b chloride channel protein CLC-a chloride channel protein CLC-a-like chloride channel protein CLC-b-like chloride channel protein CLC-b chloride channel protein CLC-b chloride channel protein CLC-b chloride channel protein CLC-a-like chloride channel protein CLC-a chloride channel protein CLC-b chloride channel protein CLC-a-like chloride channel protein CLC-b chloride channel protein CLC-a chloride channel protein CLC-b-like chloride channel protein CLC-b-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 6
ath00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 3
gma01230 Biosynthesis of amino acids 3
gma04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 3
sly01200 Carbon metabolism 3
sly00620 Pyruvate metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00790 Folate biosynthesis 2
osa01240 Biosynthesis of cofactors 2
osa04122 Sulfur relay system 2
osa00910 Nitrogen metabolism 2
osa01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 2
zma01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00910 Nitrogen metabolism 4
nta01310 Nitrogen cycle 4
nta00860 Porphyrin metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00910 Nitrogen metabolism 3
nta01310 Nitrogen cycle 3
nta00860 Porphyrin metabolism 2
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834090 822336 778094 100788620 101249604 101244821 4352132 100502532 103875243 103864237 100260066 7456226 11427694 25497844 123136113 123136114 123402053 123403982 107956992 107899713 106376961 106405923 8058450 102601748 102603214 102628105 100825238 107777321 107767514
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