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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123144071   ubiquitin receptor RAD23b 
 tae-r.2   123103689   probable ubiquitin receptor RAD23 
 tae-r.2   123149972   ubiquitin receptor RAD23d 
 tae-r.2   123121483   probable ubiquitin receptor RAD23 
 hvu-r.1   123407404   ubiquitin receptor RAD23d-like 
 bdi-r.1   100838271   ubiquitin receptor RAD23d 
 bdi-r.1   100830156   probable ubiquitin receptor RAD23 
 bdi-r.1   100823797   probable ubiquitin receptor RAD23 
 osa-u.5   4340699   ubiquitin receptor RAD23d 
 osa-u.5   4328500   ubiquitin receptor RAD23b 
 osa-u.5   4345632   probable ubiquitin receptor RAD23 
 zma-u.5   100282762   uncharacterized LOC100282762 
 zma-u.5   100282427   uncharacterized LOC100282427 
 zma-u.5   100274222   DNA repair protein RAD23 
 sbi-r.1   110432948   probable ubiquitin receptor RAD23 
 sbi-r.1   110430980   ubiquitin receptor RAD23d-like 
 sbi-r.1   8079399   ubiquitin receptor RAD23b 
 ath-u.5   RAD23C   Rad23 UV excision repair protein family 
 ath-u.5   RAD23D   Rad23 UV excision repair protein family 
 ath-u.5   RAD23A   Rad23 UV excision repair protein family 
 gma-u.5   100819019   putative DNA repair protein RAD23-1-like 
 gma-u.5   100818012   ubiquitin receptor RAD23c 
 gma-u.5   100817821   ubiquitin receptor RAD23d 
 sly-u.5   101251966   ubiquitin receptor RAD23b 
 sly-u.5   RAD23d   ubiquitin receptor RAD23d 
 sly-u.5   101249452   ubiquitin receptor RAD23c 
 bra-r.6   103858967   ubiquitin receptor RAD23c 
 bra-r.6   103850114   ubiquitin receptor RAD23d 
 vvi-u.5   100267246   ubiquitin receptor RAD23b 
 vvi-u.5   100245820   ubiquitin receptor RAD23c 
 vvi-u.5   100244610   ubiquitin receptor RAD23c 
 ppo-u.5   7489348   ubiquitin receptor RAD23d 
 ppo-u.5   7477421   ubiquitin receptor RAD23c 
 ppo-u.5   7488352   ubiquitin receptor RAD23d 
 mtr-u.5   25488002   ubiquitin receptor RAD23b 
 mtr-u.5   25499820   ubiquitin receptor RAD23d 
 mtr-u.5   112418701   ubiquitin receptor RAD23b 
 ghi-r.1   107920497   ubiquitin receptor RAD23c 
 ghi-r.1   107889033   ubiquitin receptor RAD23b 
 ghi-r.1   107932403   ubiquitin receptor RAD23c 
 bna-r.1   111203375   ubiquitin receptor RAD23d 
 bna-r.1   125607895   ubiquitin receptor RAD23d-like 
 bna-r.1   125606963   ubiquitin receptor RAD23c-like 
 sot-r.1   102577665   uncharacterized LOC102577665 
 sot-r.1   102604588   ubiquitin receptor RAD23d 
 sot-r.1   102599587   ubiquitin receptor RAD23d-like 
 cit-r.1   102620700   ubiquitin receptor RAD23b 
 cit-r.1   102614644   ubiquitin receptor RAD23c-like 
 cit-r.1   102610300   ubiquitin receptor RAD23d-like 
 nta-r.1   107761114   ubiquitin receptor RAD23b 
 nta-r.1   107764209   ubiquitin receptor RAD23b-like 
 nta-r.1   107764526   ubiquitin receptor RAD23b 
 cre-r.1   CHLRE_08g366400v5   uncharacterized protein 

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Top 50 coexpressed genes to 123144071 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123144071 (tae-r.2 coexpression data)

CoexMap"123144071"


taeLOC123144071 | Entrez gene ID : 123144071    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03420 [list] [network] Nucleotide excision repair (265 genes)
taes04141 [list] [network] Protein processing in endoplasmic reticulum (827 genes)
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (126 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (397 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (578 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2324 genes)  IEA  
GO MF
GO:0070628 [list] [network] proteasome binding  (38 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (104 genes)  IEA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (104 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (201 genes)  IEA  
Protein XP_044419025.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  nucl_plas 2,  chlo 2,  cyto 2,  mito 2,  chlo_mito 2  (predict for XP_044419025.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_044419025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123144071
tae-r.2
for
123103689
tae-r.2
for
123149972
tae-r.2
for
123121483
hvu-r.1
for
123407404
bdi-r.1
for
100838271
bdi-r.1
for
100830156
bdi-r.1
for
100823797
osa-u.5
for
4340699
osa-u.5
for
4328500
osa-u.5
for
4345632
zma-u.5
for
100282762
zma-u.5
for
100282427
zma-u.5
for
100274222
sbi-r.1
for
110432948
sbi-r.1
for
110430980
sbi-r.1
for
8079399
ath-u.5
for
RAD23C
ath-u.5
for
RAD23D
ath-u.5
for
RAD23A
gma-u.5
for
100819019
gma-u.5
for
100818012
gma-u.5
for
100817821
sly-u.5
for
101251966
sly-u.5
for
RAD23d
sly-u.5
for
101249452
bra-r.6
for
103858967
bra-r.6
for
103850114
vvi-u.5
for
100267246
vvi-u.5
for
100245820
vvi-u.5
for
100244610
ppo-u.5
for
7489348
ppo-u.5
for
7477421
ppo-u.5
for
7488352
mtr-u.5
for
25488002
mtr-u.5
for
25499820
mtr-u.5
for
112418701
ghi-r.1
for
107920497
ghi-r.1
for
107889033
ghi-r.1
for
107932403
bna-r.1
for
111203375
bna-r.1
for
125607895
bna-r.1
for
125606963
sot-r.1
for
102577665
sot-r.1
for
102604588
sot-r.1
for
102599587
cit-r.1
for
102620700
cit-r.1
for
102614644
cit-r.1
for
102610300
nta-r.1
for
107761114
nta-r.1
for
107764209
nta-r.1
for
107764526
cre-r.1
for
CHLRE_08g366400v5


Ortholog ID: 748
Species tae tae tae hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre
Symbol LOC123121483 LOC123132493 LOC123136563 LOC123407404 LOC123396360 LOC100838271 LOC100830156 LOC100823267 LOC4328500 LOC4345632 LOC4347014 LOC100282427 LOC100274222 LOC100283179 LOC110432948 LOC110430980 LOC8079399 RAD23D RAD23A RAD23B LOC100819019 LOC100814162 LOC100813881 LOC101251966 RAD23d LOC101258124 LOC103858967 LOC103850114 LOC103842858 LOC100267246 LOC100245820 LOC100244610 LOC7489348 LOC7476798 LOC18099502 LOC25488002 LOC25499820 LOC112418701 LOC107919971 LOC107913821 LOC107891755 LOC106438939 LOC106352651 LOC106429448 LOC102577665 LOC102604588 LOC102599587 LOC102620700 LOC102614644 LOC102610300 LOC107764526 LOC107783697 LOC107796487 CHLRE_08g366400v5
Function* probable ubiquitin receptor RAD23 ubiquitin receptor RAD23b ubiquitin receptor RAD23b ubiquitin receptor RAD23d-like probable ubiquitin receptor RAD23 ubiquitin receptor RAD23d probable ubiquitin receptor RAD23 ubiquitin receptor RAD23b ubiquitin receptor RAD23b probable ubiquitin receptor RAD23 probable ubiquitin receptor RAD23 uncharacterized LOC100282427 DNA repair protein RAD23 uncharacterized LOC100283179 probable ubiquitin receptor RAD23 ubiquitin receptor RAD23d-like ubiquitin receptor RAD23b Rad23 UV excision repair protein family Rad23 UV excision repair protein family Rad23 UV excision repair protein family putative DNA repair protein RAD23-1-like ubiquitin receptor RAD23c ubiquitin receptor RAD23c-like ubiquitin receptor RAD23b ubiquitin receptor RAD23d ubiquitin receptor RAD23c ubiquitin receptor RAD23c ubiquitin receptor RAD23d probable ubiquitin receptor RAD23a ubiquitin receptor RAD23b ubiquitin receptor RAD23c ubiquitin receptor RAD23c ubiquitin receptor RAD23d ubiquitin receptor RAD23b ubiquitin receptor RAD23c ubiquitin receptor RAD23b ubiquitin receptor RAD23d ubiquitin receptor RAD23b ubiquitin receptor RAD23c ubiquitin receptor RAD23b ubiquitin receptor RAD23b ubiquitin receptor RAD23c ubiquitin receptor RAD23d ubiquitin receptor RAD23d uncharacterized LOC102577665 ubiquitin receptor RAD23d ubiquitin receptor RAD23d-like ubiquitin receptor RAD23b ubiquitin receptor RAD23c-like ubiquitin receptor RAD23d-like ubiquitin receptor RAD23b ubiquitin receptor RAD23d ubiquitin receptor RAD23d uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae03420 Nucleotide excision repair 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03420 Nucleotide excision repair 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu03013 Nucleocytoplasmic transport 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00600 Sphingolipid metabolism 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 3
osa03410 Base excision repair 2
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 7
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 3
ath03420 Nucleotide excision repair 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath04141 Protein processing in endoplasmic reticulum 3
ath04382 Cornified envelope formation 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 4
gma04141 Protein processing in endoplasmic reticulum 4
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 5
gma03420 Nucleotide excision repair 4
gma00030 Pentose phosphate pathway 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 10
sly04141 Protein processing in endoplasmic reticulum 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 11
bra04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
vvi03013 Nucleocytoplasmic transport 2
vvi03082 ATP-dependent chromatin remodeling 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03420 Nucleotide excision repair 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04144 Endocytosis 3
ppo03083 Polycomb repressive complex 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
mtr03010 Ribosome 3
mtr03420 Nucleotide excision repair 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 6
mtr04144 Endocytosis 3
mtr03420 Nucleotide excision repair 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 8
ghi04141 Protein processing in endoplasmic reticulum 8
ghi03018 RNA degradation 2
ghi00240 Pyrimidine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04141 Protein processing in endoplasmic reticulum 6
ghi00030 Pentose phosphate pathway 2
ghi00230 Purine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04141 Protein processing in endoplasmic reticulum 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03420 Nucleotide excision repair 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit04712 Circadian rhythm - plant 2
cit03015 mRNA surveillance pathway 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 4
cit01240 Biosynthesis of cofactors 3
cit01212 Fatty acid metabolism 3
cit04146 Peroxisome 3
cit00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04070 Phosphatidylinositol signaling system 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 13
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123121483 123132493 123136563 123407404 123396360 100838271 100830156 100823267 4328500 4345632 4347014 100282427 100274222 100283179 110432948 110430980 8079399 833835 838188 844304 100819019 100814162 100813881 101251966 101246007 101258124 103858967 103850114 103842858 100267246 100245820 100244610 7489348 7476798 18099502 25488002 25499820 112418701 107919971 107913821 107891755 106438939 106352651 106429448 102577665 102604588 102599587 102620700 102614644 102610300 107764526 107783697 107796487 5721666
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