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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123150891   barley B recombinant-like protein D 
 tae-r.2   123168078   barley B recombinant-like protein D 
 tae-r.2   123088207   barley B recombinant-like protein D 
 hvu-r.1   123410194   barley B recombinant-like protein D 
 bdi-r.1   100829624   barley B recombinant-like protein D 
 osa-u.5   4340004   barley B recombinant-like protein D 
 zma-u.5   100273963   BBR/BPC transcription factor 
 sbi-r.1   8069061   barley B recombinant-like protein D 
 ath-u.5   BPC4   basic pentacysteine 4 
 ath-u.5   BPC5   basic pentacysteine 5 
 ath-u.5   BPC6   basic pentacysteine 6 
 gma-u.5   100813103   protein BASIC PENTACYSTEINE4 
 gma-u.5   100809369   uncharacterized LOC100809369 
 gma-u.5   100785547   protein BASIC PENTACYSTEINE4 
 sly-u.5   BBR/BPC4   GAGA-binding transcriptional activator 
 sly-u.5   101259787   protein BASIC PENTACYSTEINE5 
 bra-r.6   103835155   protein BASIC PENTACYSTEINE5 
 bra-r.6   103830249   protein BASIC PENTACYSTEINE6 
 bra-r.6   103841875   protein BASIC PENTACYSTEINE6 
 vvi-u.5   100233070   GAGA-binding transcriptional activator BBR/BPC6-like 
 vvi-u.5   100233069   GAGA-binding transcriptional activator BBR/BPC4-like 
 ppo-u.5   7477653   protein BASIC PENTACYSTEINE6 
 ppo-u.5   7479698   protein BASIC PENTACYSTEINE6 
 ppo-u.5   7463987   protein BASIC PENTACYSTEINE4 
 mtr-u.5   11439421   protein BASIC PENTACYSTEINE4 
 mtr-u.5   11428067   protein BASIC PENTACYSTEINE6 
 ghi-r.1   107918007   protein BASIC PENTACYSTEINE6 
 ghi-r.1   107922158   protein BASIC PENTACYSTEINE6 
 ghi-r.1   107940796   protein BASIC PENTACYSTEINE4 
 bna-r.1   106349486   protein BASIC PENTACYSTEINE5 
 bna-r.1   106402416   protein BASIC PENTACYSTEINE6 
 bna-r.1   111200361   protein BASIC PENTACYSTEINE6 
 sot-r.1   BBR/BPC4   protein BASIC PENTACYSTEINE4-like 
 sot-r.1   BBR/BPC3   protein BASIC PENTACYSTEINE6-like 
 cit-r.1   102620390   protein BASIC PENTACYSTEINE4 
 cit-r.1   102615788   protein BASIC PENTACYSTEINE6 
 nta-r.1   107801378   protein BASIC PENTACYSTEINE4-like 
 nta-r.1   107795483   protein BASIC PENTACYSTEINE6 

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Top 50 coexpressed genes to 123150891 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123150891 (tae-r.2 coexpression data)

CoexMap"123150891"


taeLOC123150891 | Entrez gene ID : 123150891    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 3 3 2 3 2 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009723 [list] [network] response to ethylene  (212 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (2032 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3484 genes)  IEA  
Protein XP_044426637.1 [sequence] [blastp]
XP_044426638.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044426637.1)
nucl 9  (predict for XP_044426638.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_044426637.1)
other 7,  mito 3  (predict for XP_044426638.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123150891
tae-r.2
for
123168078
tae-r.2
for
123088207
hvu-r.1
for
123410194
bdi-r.1
for
100829624
osa-u.5
for
4340004
zma-u.5
for
100273963
sbi-r.1
for
8069061
ath-u.5
for
BPC4
ath-u.5
for
BPC5
ath-u.5
for
BPC6
gma-u.5
for
100813103
gma-u.5
for
100809369
gma-u.5
for
100785547
sly-u.5
for
BBR/BPC4
sly-u.5
for
101259787
bra-r.6
for
103835155
bra-r.6
for
103830249
bra-r.6
for
103841875
vvi-u.5
for
100233070
vvi-u.5
for
100233069
ppo-u.5
for
7477653
ppo-u.5
for
7479698
ppo-u.5
for
7463987
mtr-u.5
for
11439421
mtr-u.5
for
11428067
ghi-r.1
for
107918007
ghi-r.1
for
107922158
ghi-r.1
for
107940796
bna-r.1
for
106349486
bna-r.1
for
106402416
bna-r.1
for
111200361
sot-r.1
for
BBR/BPC4
sot-r.1
for
BBR/BPC3
cit-r.1
for
102620390
cit-r.1
for
102615788
nta-r.1
for
107801378
nta-r.1
for
107795483


Ortholog ID: 2450
Species tae tae tae hvu bdi osa zma sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta
Symbol LOC123150891 LOC123168078 LOC123088207 LOC123410194 LOC100829624 LOC4340004 LOC100273963 LOC8069061 BPC4 BPC5 BPC6 LOC100813103 LOC100785547 LOC100783502 BBR/BPC4 LOC101259787 LOC103835155 LOC103841875 LOC103861339 LOC100233070 LOC100233069 LOC7477653 LOC7479698 LOC7463987 LOC11439421 LOC11428067 LOC107918007 LOC107940796 LOC107920577 LOC111200361 LOC106446357 LOC106445106 BBR/BPC4 BBR/BPC3 LOC102620390 LOC102615788 LOC107801378 LOC107795483
Function* barley B recombinant-like protein D barley B recombinant-like protein D barley B recombinant-like protein D barley B recombinant-like protein D barley B recombinant-like protein D barley B recombinant-like protein D BBR/BPC transcription factor barley B recombinant-like protein D basic pentacysteine 4 basic pentacysteine 5 basic pentacysteine 6 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE4 basic pentacysteine 6 GAGA-binding transcriptional activator protein BASIC PENTACYSTEINE5 protein BASIC PENTACYSTEINE5 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE5 GAGA-binding transcriptional activator BBR/BPC6-like GAGA-binding transcriptional activator BBR/BPC4-like protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE4-like protein BASIC PENTACYSTEINE6-like protein BASIC PENTACYSTEINE4 protein BASIC PENTACYSTEINE6 protein BASIC PENTACYSTEINE4-like protein BASIC PENTACYSTEINE6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 3
ath04136 Autophagy - other 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00061 Fatty acid biosynthesis 3
gma01212 Fatty acid metabolism 3
gma00620 Pyruvate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 3
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00670 One carbon pool by folate 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 3
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123150891 123168078 123088207 123410194 100829624 4340004 100273963 8069061 816663 830046 834259 100813103 100785547 100783502 101055597 101259787 103835155 103841875 103861339 100233070 100233069 7477653 7479698 7463987 11439421 11428067 107918007 107940796 107920577 111200361 106446357 106445106 102597905 102587346 102620390 102615788 107801378 107795483
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