ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123154144	blue copper protein
tae-r.2	123141833	blue copper protein
tae-r.2	123131004	blue copper protein
tae-r.2	123134564	blue copper protein
hvu-r.1	123402589	blue copper protein-like
hvu-r.1	123409270	blue copper protein-like
hvu-r.1	123402699	blue copper protein-like
bdi-r.1	100830982	blue copper protein
bdi-r.1	100842239	mavicyanin
osa-u.5	4345861	blue copper protein
osa-u.5	4345860	basic blue protein
zma-u.5	100286319	blue copper protein
zma-u.5	100191824	blue copper protein
zma-u.5	100283202	blue copper protein
sbi-r.1	110436893	basic blue protein-like
sbi-r.1	8076244	uclacyanin-3
ath-u.5	BCB	blue-copper-binding protein
ath-u.5	AT1G22480	Cupredoxin superfamily protein
ath-u.5	UCC3	uclacyanin 3
gma-u.5	100527593	putative stellacyanin
gma-u.5	100789844	uclacyanin-3
gma-u.5	100306522	uncharacterized LOC100306522
sly-u.5	101254836	uclacyanin-3
sly-u.5	101252571	cucumber peeling cupredoxin
sly-u.5	101266215	blue copper protein
bra-r.6	103862895	uclacyanin-3
vvi-u.5	100250809	blue copper protein
vvi-u.5	100268054	blue copper protein
vvi-u.5	100265072	uclacyanin-3
ppo-u.5	7485466	umecyanin
ppo-u.5	7461798	blue copper protein
ppo-u.5	7470086	cucumber peeling cupredoxin
mtr-u.5	11419969	blue copper protein
mtr-u.5	11442875	blue copper protein
ghi-r.1	107942687	stellacyanin
ghi-r.1	107942465	uncharacterized LOC107942465
bna-r.1	106385502	uclacyanin-2-like
sot-r.1	102589845	blue copper protein-like
sot-r.1	102581132	blue copper protein-like
sot-r.1	102604557	mavicyanin-like
cit-r.1	102613370	umecyanin-like
cit-r.1	102613661	uclacyanin 1
nta-r.1	107760156	cucumber peeling cupredoxin
nta-r.1	107760157	cucumber peeling cupredoxin-like
nta-r.1	107781258	mavicyanin-like
cre-r.1	CHLRE_02g111900v5	uncharacterized protein

Top 50 coexpressed genes to 123154144 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123154144 (tae-r.2 coexpression data)

CoexMap"123154144"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(2781 genes)

IEA

GO MF

GO:0009055 [list] [network] electron transfer activity

(533 genes)

IEA

Protein

XP_044428870.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 1, vacu 1, golg 1, mito 1, plas 1, E.R. 1, E.R._plas 1, mito_plas 1

(predict for XP_044428870.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_044428870.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123154144	tae-r.2 for 123141833	tae-r.2 for 123131004	tae-r.2 for 123134564	hvu-r.1 for 123402589	hvu-r.1 for 123409270	hvu-r.1 for 123402699	bdi-r.1 for 100830982	bdi-r.1 for 100842239	osa-u.5 for 4345861	osa-u.5 for 4345860	zma-u.5 for 100286319	zma-u.5 for 100191824	zma-u.5 for 100283202	sbi-r.1 for 110436893	sbi-r.1 for 8076244	ath-u.5 for BCB	ath-u.5 for AT1G22480	ath-u.5 for UCC3	gma-u.5 for 100527593	gma-u.5 for 100789844	gma-u.5 for 100306522	sly-u.5 for 101254836	sly-u.5 for 101252571	sly-u.5 for 101266215	bra-r.6 for 103862895	vvi-u.5 for 100250809	vvi-u.5 for 100268054	vvi-u.5 for 100265072	ppo-u.5 for 7485466	ppo-u.5 for 7461798	ppo-u.5 for 7470086	mtr-u.5 for 11419969	mtr-u.5 for 11442875	ghi-r.1 for 107942687	ghi-r.1 for 107942465	bna-r.1 for 106385502	sot-r.1 for 102589845	sot-r.1 for 102581132	sot-r.1 for 102604557	cit-r.1 for 102613370	cit-r.1 for 102613661	nta-r.1 for 107760156	nta-r.1 for 107760157	nta-r.1 for 107781258	cre-r.1 for CHLRE_02g111900v5

Ortholog

Ortholog ID: 186

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

blue copper protein

mavicyanin

blue copper protein-like

blue copper protein

mavicyanin

blue copper protein

basic blue protein

mavicyanin

Cupredoxin superfamily protein

uncharacterized LOC541713

uncharacterized LOC100283414

basic blue protein-like

blue copper protein

Cupredoxin superfamily protein

uclacyanin-3

cucumber peeling cupredoxin

blue copper protein

early nodulin-like protein 9

dicyanin

mavicyanin

umecyanin

uclacyanin-2

blue copper protein

uclacyanin-3

blue copper protein

umecyanin

cucumber peeling cupredoxin

umecyanin

blue copper protein

umecyanin

blue copper protein

uclacyanin-3-like

blue copper protein

mavicyanin-like

cucumber peeling cupredoxin-like

blue copper protein

mavicyanin

cucumber peeling cupredoxin-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2
hvu00500	Starch and sucrose metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00941	Flavonoid biosynthesis	4
bdi00670	One carbon pool by folate	3
bdi01230	Biosynthesis of amino acids	2
bdi01240	Biosynthesis of cofactors	2
bdi00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2
bdi00940	Phenylpropanoid biosynthesis	2
bdi00941	Flavonoid biosynthesis	2
bdi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	4
osa04626	Plant-pathogen interaction	3
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00941	Flavonoid biosynthesis	4
sbi04712	Circadian rhythm - plant	3
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	11
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	8
gma00941	Flavonoid biosynthesis	5
gma00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	5
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
ppo01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2
sot04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	4
nta00941	Flavonoid biosynthesis	4
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
nta00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta00073	Cutin, suberine and wax biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

123134504

123116316

123402589

123409270

123396882

100830982

100842755

100843685

4345861

4345860

9266186

100382230

541713

100283414

110436893

8083259

843555

100789844

100806172

101266215

104648249

543645

103867918

103845697

103866157

100268054

100265072

100243780

7485466

7470086

7470088

11425589

11429653

121225219

121225221

121230337

106417681

106395427

106454792

102604557

102600778

102600455

102618126

107788304

107814170

107825924

5725242

The preparation time of this page was 1.5 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	2	2	3	2	3	3	3	1	3	3	2	2	1	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123154144 (tae-r.2 coexpression data)

Top 50 enrichment test to 123154144 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**