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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123156255   squamous cell carcinoma antigen recognized by T-cells 3 
 tae-r.2   123169772   squamous cell carcinoma antigen recognized by T-cells 3 
 tae-r.2   123147583   squamous cell carcinoma antigen recognized by T-cells 3 
 hvu-r.1   123408517   squamous cell carcinoma antigen recognized by T-cells 3 
 bdi-r.1   100845498   squamous cell carcinoma antigen recognized by T-cells 3 
 osa-u.5   4344498   uncharacterized LOC4344498 
 zma-u.5   100216679   EMBRYO DEFECTIVE 140 
 sbi-r.1   110436958   squamous cell carcinoma antigen recognized by T-cells 3 
 ath-u.5   EMB140   EMBRYO DEFECTIVE 140 
 gma-u.5   100801333   squamous cell carcinoma antigen recognized by T-cells 3 
 gma-u.5   100794881   squamous cell carcinoma antigen recognized by T-cells 3 
 sly-u.5   101254341   uncharacterized LOC101254341 
 bra-r.6   103861930   squamous cell carcinoma antigen recognized by T-cells 3 
 vvi-u.5   100262646   uncharacterized LOC100262646 
 vvi-u.5   109123390   uncharacterized LOC109123390 
 ppo-u.5   18098375   uncharacterized LOC18098375 
 mtr-u.5   25500419   squamous cell carcinoma antigen recognized by T-cells 3 
 ghi-r.1   107958523   squamous cell carcinoma antigen recognized by T-cells 3 
 ghi-r.1   107914196   squamous cell carcinoma antigen recognized by T-cells 3 
 ghi-r.1   107906307   squamous cell carcinoma antigen recognized by T-cells 3 
 bna-r.1   106376032   squamous cell carcinoma antigen recognized by T-cells 3 
 bna-r.1   106415583   squamous cell carcinoma antigen recognized by T-cells 3 
 sot-r.1   102601827   squamous cell carcinoma antigen recognized by T-cells 3 
 cit-r.1   102627232   uncharacterized LOC102627232 
 nta-r.1   107803306   uncharacterized LOC107803306 
 nta-r.1   107775018   uncharacterized LOC107775018 
 cre-r.1   CHLRE_12g546700v5   uncharacterized protein 

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Top 50 coexpressed genes to 123156255 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123156255 (tae-r.2 coexpression data)

CoexMap"123156255"


taeLOC123156255 | Entrez gene ID : 123156255    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 2 1 1 3 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1836 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044430333.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044430333.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044430333.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123156255
tae-r.2
for
123169772
tae-r.2
for
123147583
hvu-r.1
for
123408517
bdi-r.1
for
100845498
osa-u.5
for
4344498
zma-u.5
for
100216679
sbi-r.1
for
110436958
ath-u.5
for
EMB140
gma-u.5
for
100801333
gma-u.5
for
100794881
sly-u.5
for
101254341
bra-r.6
for
103861930
vvi-u.5
for
100262646
vvi-u.5
for
109123390
ppo-u.5
for
18098375
mtr-u.5
for
25500419
ghi-r.1
for
107958523
ghi-r.1
for
107914196
ghi-r.1
for
107906307
bna-r.1
for
106376032
bna-r.1
for
106415583
sot-r.1
for
102601827
cit-r.1
for
102627232
nta-r.1
for
107803306
nta-r.1
for
107775018
cre-r.1
for
CHLRE_12g546700v5


Ortholog ID: 9044
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC123156255 LOC123169772 LOC123147583 LOC123408517 LOC100845498 LOC4344498 LOC100216679 LOC110436958 EMB140 LOC100801333 LOC100794881 LOC101254341 LOC103861930 LOC100262646 LOC109123390 LOC18098375 LOC25500419 LOC107958523 LOC107914196 LOC107906307 LOC106376032 LOC106415583 LOC102601827 LOC102627232 LOC107803306 LOC107775018 CHLRE_12g546700v5
Function* squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 uncharacterized LOC4344498 EMBRYO DEFECTIVE 140 squamous cell carcinoma antigen recognized by T-cells 3 EMBRYO DEFECTIVE 140 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 uncharacterized LOC101254341 squamous cell carcinoma antigen recognized by T-cells 3 uncharacterized LOC100262646 uncharacterized LOC109123390 uncharacterized LOC18098375 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 squamous cell carcinoma antigen recognized by T-cells 3 uncharacterized LOC102627232 uncharacterized LOC107803306 uncharacterized LOC107775018 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03082 ATP-dependent chromatin remodeling 3
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123156255 123169772 123147583 123408517 100845498 4344498 100216679 110436958 828529 100801333 100794881 101254341 103861930 100262646 109123390 18098375 25500419 107958523 107914196 107906307 106376032 106415583 102601827 102627232 107803306 107775018 5719592
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