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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123180433   pentatricopeptide repeat-containing protein At2g34400 
 hvu-r.1   123424787   pentatricopeptide repeat-containing protein At2g34400 
 bdi-r.1   100845612   pentatricopeptide repeat-containing protein At2g34400 
 osa-u.5   4338370   pentatricopeptide repeat-containing protein At2g34400 
 zma-u.5   103633526   pentatricopeptide repeat-containing protein At2g34400 
 sbi-r.1   8073138   pentatricopeptide repeat-containing protein At2g34400 
 ath-u.5   AT2G34400   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100813380   pentatricopeptide repeat-containing protein At2g34400 
 gma-u.5   100786038   pentatricopeptide repeat-containing protein At2g34400 
 sly-u.5   101268772   pentatricopeptide repeat-containing protein At2g34400 
 bra-r.6   103865333   pentatricopeptide repeat-containing protein At2g34400 
 vvi-u.5   100255714   pentatricopeptide repeat-containing protein At2g34400 
 ghi-r.1   107907361   pentatricopeptide repeat-containing protein At2g34400 
 ghi-r.1   107907505   pentatricopeptide repeat-containing protein At2g34400 
 bna-r.1   125585613   pentatricopeptide repeat-containing protein At2g34400-like 
 bna-r.1   106432783   pentatricopeptide repeat-containing protein At2g34400 
 bna-r.1   106447500   pentatricopeptide repeat-containing protein At2g34400-like 
 sot-r.1   102600475   pentatricopeptide repeat-containing protein At2g34400 
 cit-r.1   102611189   pentatricopeptide repeat-containing protein At2g34400 
 nta-r.1   107804099   pentatricopeptide repeat-containing protein At2g34400-like 

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Top 50 coexpressed genes to 123180433 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123180433 (tae-r.2 coexpression data)

CoexMap"123159775"


taeLOC123159775 | Entrez gene ID : 123159775    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ghi bna sot cit nta cre ppo mtr
Paralog 1 1 1 1 1 1 1 2 1 1 1 2 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044433819.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 2,  E.R. 2,  nucl_plas 2  (predict for XP_044433819.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044433819.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123180433
hvu-r.1
for
123424787
bdi-r.1
for
100845612
osa-u.5
for
4338370
zma-u.5
for
103633526
sbi-r.1
for
8073138
ath-u.5
for
AT2G34400
gma-u.5
for
100813380
gma-u.5
for
100786038
sly-u.5
for
101268772
bra-r.6
for
103865333
vvi-u.5
for
100255714
ghi-r.1
for
107907361
ghi-r.1
for
107907505
bna-r.1
for
125585613
bna-r.1
for
106432783
bna-r.1
for
106447500
sot-r.1
for
102600475
cit-r.1
for
102611189
nta-r.1
for
107804099


Ortholog ID: 7941
Species tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ghi ghi bna bna bna sot cit nta
Symbol LOC123180433 LOC123424787 LOC100845612 LOC4338370 LOC103633526 LOC8073138 AT2G34400 LOC100813380 LOC100786038 LOC101268772 LOC103865333 LOC100255714 LOC7484339 LOC107907361 LOC107907505 LOC125585613 LOC106432783 LOC106447500 LOC102600475 LOC102611189 LOC107804099
Function* pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123180433 123424787 100845612 4338370 103633526 8073138 818003 100813380 100786038 101268772 103865333 100255714 7484339 107907361 107907505 125585613 106432783 106447500 102600475 102611189 107804099
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