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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125585613   pentatricopeptide repeat-containing protein At2g34400-like 
 ath-u.5   AT2G34400   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100813380   pentatricopeptide repeat-containing protein At2g34400 
 gma-u.5   100786038   pentatricopeptide repeat-containing protein At2g34400 
 vvi-u.5   100255714   pentatricopeptide repeat-containing protein At2g34400 
 sly-u.5   101268772   pentatricopeptide repeat-containing protein At2g34400 
 osa-u.5   4338370   pentatricopeptide repeat-containing protein At2g34400 
 zma-u.5   103633526   pentatricopeptide repeat-containing protein At2g34400 

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Top 50 coexpressed genes to 125585613 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125585613 (bna-r.1 coexpression data)

CoexMap"125585613"


bnaLOC125585613 | Entrez gene ID : 125585613    
Species bna ath gma vvi sly osa zma bdi mtr bra hvu cit ppo sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (18248 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048610958.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_048610958.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_048610958.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125585613
ath-u.5
for
AT2G34400
gma-u.5
for
100813380
gma-u.5
for
100786038
vvi-u.5
for
100255714
sly-u.5
for
101268772
osa-u.5
for
4338370
zma-u.5
for
103633526


Ortholog ID: 7941
Species bna bna bra ath ghi ghi cit gma gma vvi sly sot nta osa zma tae hvu sbi bdi
Symbol LOC106432783 LOC106447500 LOC103865333 AT2G34400 LOC107907361 LOC107907505 LOC102611189 LOC100813380 LOC100786038 LOC100255714 LOC101268772 LOC102600475 LOC107804099 LOC4338370 LOC103633526 LOC123180433 LOC123424787 LOC8073138 LOC100845612
Function* pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like pentatricopeptide repeat-containing protein At2g34400 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400-like pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400 pentatricopeptide repeat-containing protein At2g34400
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106432783 106447500 103865333 818003 107907361 107907505 102611189 100813380 100786038 100255714 101268772 102600475 107804099 4338370 103633526 123180433 123424787 8073138 100845612
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