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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123161093   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 tae-r.2   123167629   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 hvu-r.1   123411711   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 bdi-r.1   100846933   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 osa-u.5   4331249   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 osa-u.5   9270448   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 zma-u.5   103627916   uncharacterized LOC103627916 
 sbi-r.1   8056094   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 ath-u.5   AT3G19810   BTB/POZ domain protein, putative (DUF177) 
 gma-u.5   100792185   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 sly-u.5   101255042   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 bra-r.6   103869419   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 vvi-u.5   100854910   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 ppo-u.5   7481592   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 mtr-u.5   11406154   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 ghi-r.1   107888497   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 ghi-r.1   107894470   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 ghi-r.1   107931340   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 bna-r.1   125608855   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like 
 bna-r.1   106380473   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like 
 bna-r.1   106380471   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like 
 sot-r.1   102588036   uncharacterized LOC102588036 
 cit-r.1   102619910   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 
 nta-r.1   107831720   large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 

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Top 50 coexpressed genes to 123161093 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123161093 (tae-r.2 coexpression data)

CoexMap"123161093"


taeLOC123161093 | Entrez gene ID : 123161093    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 1 1 3 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044434882.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044434882.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_044434882.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123161093
tae-r.2
for
123167629
hvu-r.1
for
123411711
bdi-r.1
for
100846933
osa-u.5
for
4331249
osa-u.5
for
9270448
zma-u.5
for
103627916
sbi-r.1
for
8056094
ath-u.5
for
AT3G19810
gma-u.5
for
100792185
sly-u.5
for
101255042
bra-r.6
for
103869419
vvi-u.5
for
100854910
ppo-u.5
for
7481592
mtr-u.5
for
11406154
ghi-r.1
for
107888497
ghi-r.1
for
107894470
ghi-r.1
for
107931340
bna-r.1
for
125608855
bna-r.1
for
106380473
bna-r.1
for
106380471
sot-r.1
for
102588036
cit-r.1
for
102619910
nta-r.1
for
107831720


Ortholog ID: 8472
Species tae tae hvu bdi osa osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna bna sot cit nta
Symbol LOC123161093 LOC123167629 LOC123411711 LOC100846933 LOC4331249 LOC9270448 LOC103627916 LOC8056094 AT3G19810 LOC100792185 LOC101255042 LOC103869419 LOC100854910 LOC7481592 LOC11406154 LOC107888497 LOC107894470 LOC107888385 LOC125608855 LOC106371899 LOC125608859 LOC102588036 LOC102619910 LOC107831720
Function* large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic uncharacterized LOC103627916 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic BTB/POZ domain protein, putative (DUF177) large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like uncharacterized LOC102588036 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00860 Porphyrin metabolism 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123161093 123167629 123411711 100846933 4331249 9270448 103627916 8056094 821518 100792185 101255042 103869419 100854910 7481592 11406154 107888497 107894470 107888385 125608855 106371899 125608859 102588036 102619910 107831720
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