ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123162910	uncharacterized LOC123162910
tae-r.2	123163742	uncharacterized LOC123163742
tae-r.2	123136249	uncharacterized LOC123136249
tae-r.2	123132206	uncharacterized LOC123132206
hvu-r.1	123403253	uncharacterized LOC123403253
hvu-r.1	123411629	uncharacterized LOC123411629
bdi-r.1	100833844	uncharacterized LOC100833844
osa-u.5	4341126	uncharacterized LOC4341126
zma-u.5	100280096	CAAX amino terminal protease family protein
sbi-r.1	8058827	uncharacterized LOC8058827
ath-u.5	AT5G60750	CAAX amino terminal protease family protein
gma-u.5	100816897	putative protease
gma-u.5	100808097	uncharacterized LOC100808097
gma-u.5	100779061	uncharacterized LOC100779061
sly-u.5	101244021	uncharacterized LOC101244021
bra-r.6	103851485	uncharacterized LOC103851485
vvi-u.5	100250094	uncharacterized LOC100250094
vvi-u.5	100254162	uncharacterized LOC100254162
ppo-u.5	7472733	uncharacterized LOC7472733
ppo-u.5	7458205	uncharacterized LOC7458205
mtr-u.5	11414841	uncharacterized LOC11414841
mtr-u.5	25502130	uncharacterized LOC25502130
ghi-r.1	121204973	uncharacterized LOC121204973
ghi-r.1	107952436	uncharacterized LOC107952436
ghi-r.1	107950633	uncharacterized LOC107950633
bna-r.1	106411316	uncharacterized LOC106411316
bna-r.1	106385140	uncharacterized LOC106385140
sot-r.1	102605715	uncharacterized LOC102605715
cit-r.1	102608238	uncharacterized LOC102608238
nta-r.1	107761747	uncharacterized LOC107761747
nta-r.1	107821891	uncharacterized LOC107821891
cre-r.1	CHLRE_07g348750v5	uncharacterized protein
cre-r.1	CHLRE_17g712350v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0071586 [list] [network] CAAX-box protein processing

(30 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(10843 genes)

IEA

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity

(238 genes)

IEA

Protein

XP_044436617.1 [sequence] [blastp]
XP_044436618.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, chlo 1, pero 1	(predict for XP_044436617.1)
plas 6, cyto_plas 4, mito 1, E.R. 1	(predict for XP_044436618.1)

Subcellular
localization
TargetP

chlo 8, mito 4	(predict for XP_044436617.1)
mito 7, other 4	(predict for XP_044436618.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123162910	tae-r.2 for 123163742	tae-r.2 for 123136249	tae-r.2 for 123132206	hvu-r.1 for 123403253	hvu-r.1 for 123411629	bdi-r.1 for 100833844	osa-u.5 for 4341126	zma-u.5 for 100280096	sbi-r.1 for 8058827	ath-u.5 for AT5G60750	gma-u.5 for 100816897	gma-u.5 for 100808097	gma-u.5 for 100779061	sly-u.5 for 101244021	bra-r.6 for 103851485	vvi-u.5 for 100250094	vvi-u.5 for 100254162	ppo-u.5 for 7472733	ppo-u.5 for 7458205	mtr-u.5 for 11414841	mtr-u.5 for 25502130	ghi-r.1 for 121204973	ghi-r.1 for 107952436	ghi-r.1 for 107950633	bna-r.1 for 106411316	bna-r.1 for 106385140	sot-r.1 for 102605715	cit-r.1 for 102608238	nta-r.1 for 107761747	nta-r.1 for 107821891	cre-r.1 for CHLRE_07g348750v5	cre-r.1 for CHLRE_17g712350v5

Ortholog

Ortholog ID: 5187

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123162910

uncharacterized LOC123132206

uncharacterized LOC123143752

uncharacterized LOC123403253

uncharacterized LOC123411629

uncharacterized LOC100833844

uncharacterized LOC4341126

CAAX amino terminal protease family protein

uncharacterized LOC8058827

CAAX amino terminal protease family protein

putative protease

uncharacterized LOC100779061

uncharacterized LOC100775964

uncharacterized LOC101244021

uncharacterized LOC103851485

uncharacterized LOC100250094

uncharacterized LOC100254162

uncharacterized LOC7472733

uncharacterized LOC7458205

uncharacterized LOC11414841

uncharacterized LOC25502130

uncharacterized LOC107952436

uncharacterized LOC107950633

uncharacterized LOC107947688

uncharacterized LOC106411316

uncharacterized LOC106385140

uncharacterized LOC102605715

uncharacterized LOC102608238

uncharacterized LOC107761747

uncharacterized LOC107821891

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	2
ath00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

123162910

123132206

123143752

123403253

123411629

100833844

4341126

100280096

8058827

836196

100816897

100779061

100775964

101244021

103851485

100250094

100254162

7472733

7458205

11414841

25502130

107952436

107950633

107947688

106411316

106385140

102605715

102608238

107761747

107821891

5718160

66056965

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123162910 (tae-r.2 coexpression data)

Top 50 enrichment test to 123162910 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	1	1	1	1	1	3	1	1	2	2	2	3	2	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123162910 (tae-r.2 coexpression data)

Top 50 enrichment test to 123162910 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**