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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123164835   F-box/kelch-repeat protein At1g22040 
 tae-r.2   123149973   F-box/kelch-repeat protein At1g22040 
 tae-r.2   123137143   F-box/kelch-repeat protein At1g22040 
 tae-r.2   123088493   F-box/kelch-repeat protein At1g22040 
 hvu-r.1   123410227   F-box/kelch-repeat protein At1g22040-like 
 hvu-r.1   123402996   F-box/kelch-repeat protein At1g22040-like 
 bdi-r.1   100834943   F-box/kelch-repeat protein At1g22040 
 osa-u.5   4329747   F-box/kelch-repeat protein At1g22040 
 osa-u.5   4348452   F-box/kelch-repeat protein At1g22040 
 zma-u.5   100193097   uncharacterized LOC100193097 
 zma-u.5   100281539   uncharacterized LOC100281539 
 sbi-r.1   8068941   F-box/kelch-repeat protein At1g22040 
 sbi-r.1   110437121   F-box/kelch-repeat protein At1g22040-like 
 ath-u.5   AT1G22040   Galactose oxidase/kelch repeat superfamily protein 
 gma-u.5   100815614   F-box/kelch-repeat protein At1g22040 
 gma-u.5   100810940   F-box/kelch-repeat protein At1g22040 
 gma-u.5   100806691   F-box/kelch-repeat protein At1g22040 
 sly-u.5   101253432   F-box/kelch-repeat protein At1g22040 
 bra-r.6   103869082   F-box/kelch-repeat protein At1g22040 
 vvi-u.5   100245120   F-box/kelch-repeat protein At1g22040 
 vvi-u.5   100248808   F-box/kelch-repeat protein At1g22040 
 ppo-u.5   7469113   F-box/kelch-repeat protein At1g22040 
 ppo-u.5   7463196   F-box/kelch-repeat protein At1g22040 
 mtr-u.5   11433861   F-box/kelch-repeat protein At1g22040 
 mtr-u.5   25489398   F-box/kelch-repeat protein At1g22040 
 ghi-r.1   107901435   F-box/kelch-repeat protein At1g22040 
 ghi-r.1   107920660   F-box/kelch-repeat protein At1g22040 
 ghi-r.1   107940749   F-box/kelch-repeat protein At1g22040 
 bna-r.1   125589979   F-box/kelch-repeat protein At1g22040-like 
 bna-r.1   106401444   F-box/kelch-repeat protein At1g22040 
 bna-r.1   106437286   F-box/kelch-repeat protein At1g22040-like 
 sot-r.1   102588371   F-box/kelch-repeat protein At1g22040 
 cit-r.1   102622536   F-box/kelch-repeat protein At1g22040 
 cit-r.1   102620532   F-box/kelch-repeat protein At1g22040-like 
 nta-r.1   107783054   F-box/kelch-repeat protein At1g22040-like 
 nta-r.1   107830516   F-box/kelch-repeat protein At1g22040 

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Top 50 coexpressed genes to 123164835 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123164835 (tae-r.2 coexpression data)

CoexMap"123164835"


taeLOC123164835 | Entrez gene ID : 123164835    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 1 2 2 2 1 3 1 1 2 2 2 3 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044438362.1 [sequence] [blastp]
XP_044438364.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3,  cyto_pero 3  (predict for XP_044438362.1)
cyto 5,  chlo 3,  cyto_nucl 3,  cyto_pero 3  (predict for XP_044438364.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_044438362.1)
chlo 7,  other 5  (predict for XP_044438364.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123164835
tae-r.2
for
123149973
tae-r.2
for
123137143
tae-r.2
for
123088493
hvu-r.1
for
123410227
hvu-r.1
for
123402996
bdi-r.1
for
100834943
osa-u.5
for
4329747
osa-u.5
for
4348452
zma-u.5
for
100193097
zma-u.5
for
100281539
sbi-r.1
for
8068941
sbi-r.1
for
110437121
ath-u.5
for
AT1G22040
gma-u.5
for
100815614
gma-u.5
for
100810940
gma-u.5
for
100806691
sly-u.5
for
101253432
bra-r.6
for
103869082
vvi-u.5
for
100245120
vvi-u.5
for
100248808
ppo-u.5
for
7469113
ppo-u.5
for
7463196
mtr-u.5
for
11433861
mtr-u.5
for
25489398
ghi-r.1
for
107901435
ghi-r.1
for
107920660
ghi-r.1
for
107940749
bna-r.1
for
125589979
bna-r.1
for
106401444
bna-r.1
for
106437286
sot-r.1
for
102588371
cit-r.1
for
102622536
cit-r.1
for
102620532
nta-r.1
for
107783054
nta-r.1
for
107830516


Ortholog ID: 4002
Species tae tae tae hvu hvu bdi osa osa zma zma sbi sbi ath gma gma gma sly bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta
Symbol LOC123149973 LOC123137143 LOC123088493 LOC123410227 LOC123402996 LOC100834943 LOC4329747 LOC4348452 LOC100193097 LOC100281539 LOC8068941 LOC110437121 AT1G22040 LOC100806691 LOC100787256 LOC100785702 LOC101253432 LOC103869082 LOC100245120 LOC100248808 LOC7469113 LOC7463196 LOC11433861 LOC25489398 LOC107920660 LOC107962472 LOC107901283 LOC106401444 LOC106437286 LOC106451227 LOC102588371 LOC102622536 LOC102620532 LOC107783054 LOC107830516
Function* F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040-like F-box/kelch-repeat protein At1g22040-like F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 uncharacterized LOC100193097 uncharacterized LOC100281539 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040-like Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040-like F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040 F-box/kelch-repeat protein At1g22040-like F-box/kelch-repeat protein At1g22040-like F-box/kelch-repeat protein At1g22040
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04145 Phagosome 2
zma04148 Efferocytosis 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00052 Galactose metabolism 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit04141 Protein processing in endoplasmic reticulum 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123149973 123137143 123088493 123410227 123402996 100834943 4329747 4348452 100193097 100281539 8068941 110437121 838809 100806691 100787256 100785702 101253432 103869082 100245120 100248808 7469113 7463196 11433861 25489398 107920660 107962472 107901283 106401444 106437286 106451227 102588371 102622536 102620532 107783054 107830516
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