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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123165406  putative pentatricopeptide repeat-containing protein At2g02150 
 tae-r.2  123148019  putative pentatricopeptide repeat-containing protein At2g02150 
 tae-r.2  123156566  putative pentatricopeptide repeat-containing protein At2g02150 
 hvu-r.1  123410455  putative pentatricopeptide repeat-containing protein At2g02150 
 bdi-r.1  100831795  putative pentatricopeptide repeat-containing protein At2g02150 
 osa-u.5  4341324  putative pentatricopeptide repeat-containing protein At2g02150 
 sbi-r.1  8071459  putative pentatricopeptide repeat-containing protein At2g02150 

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Top 50 coexpressed genes to 123165406 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123165406 (tae-r.2 coexpression data)

CoexMap"123165406"


taeLOC123165406 | Entrez gene ID : 123165406
Species tae hvu bdi osa sbi gma bra sot zma ghi ppo sly cit ath nta cre mtr bna vvi
Paralog 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (40 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (43 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044438978.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_044438978.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044438978.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123165406


tae-r.2
for
123148019


tae-r.2
for
123156566


hvu-r.1
for
123410455


bdi-r.1
for
100831795


osa-u.5
for
4341324


sbi-r.1
for
8071459



Ortholog ID: 18389
Species tae tae tae hvu bdi osa sbi
Symbol LOC123165406 LOC123148019 LOC123156566 LOC123410455 LOC100831795 LOC4341324 LOC8071459
Function* putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150 putative pentatricopeptide repeat-containing protein At2g02150
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03013 Nucleocytoplasmic transport 2
osa03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123165406 123148019 123156566 123410455 100831795 4341324 8071459
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