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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123167261   pectate lyase 
 tae-r.2   123151851   pectate lyase 
 tae-r.2   123127312   pectate lyase 
 tae-r.2   123144374   pectate lyase 
 osa-u.5   4340103   pectate lyase 
 osa-u.5   4340099   pectate lyase 
 zma-u.5   100284055   uncharacterized LOC100284055 
 zma-u.5   100284356   pectate lyase 
 zma-u.5   107275230   uncharacterized LOC107275230 
 ath-u.5   AT2G02720   Pectate lyase family protein 
 ath-u.5   AT3G01270   Pectate lyase family protein 
 ath-u.5   AT5G15110   Pectate lyase family protein 
 gma-u.5   102664159   probable pectate lyase 3 
 gma-u.5   100780236   pectate lyase 
 sly-u.5   LAT59   pectate lyase P59 
 sly-u.5   101257960   pectate lyase-like 
 vvi-u.5   100257069   pectate lyase 
 vvi-u.5   100262177   pectate lyase 
 ghi-r.1   107919012   pectate lyase 
 bna-r.1   111204301   probable pectate lyase 19 
 bna-r.1   111211070   probable pectate lyase 3 
 bna-r.1   111211421   probable pectate lyase 19 
 cit-r.1   102621878   probable pectate lyase 19 
 nta-r.1   107761724   putative pectate lyase P59 
 nta-r.1   107823631   pectate lyase-like 

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Top 50 coexpressed genes to 123167261 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123167261 (tae-r.2 coexpression data)

CoexMap"123167261"


taeLOC123167261 | Entrez gene ID : 123167261    
Species tae osa zma ath gma sly vvi ghi bna cit nta sbi sot mtr bra hvu ppo cre bdi
Paralog 4 2 3 3 2 2 2 1 3 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00040 [list] [network] Pentose and glucuronate interconversions (238 genes)
GO BP
GO CC
GO MF
GO:0030570 [list] [network] pectate lyase activity  (25 genes)  IEA  
Protein XP_044441021.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  E.R. 3,  vacu 2,  chlo 1,  nucl 1,  golg 1  (predict for XP_044441021.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_044441021.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123167261
tae-r.2
for
123151851
tae-r.2
for
123127312
tae-r.2
for
123144374
osa-u.5
for
4340103
osa-u.5
for
4340099
zma-u.5
for
100284055
zma-u.5
for
100284356
zma-u.5
for
107275230
ath-u.5
for
AT2G02720
ath-u.5
for
AT3G01270
ath-u.5
for
AT5G15110
gma-u.5
for
102664159
gma-u.5
for
100780236
sly-u.5
for
LAT59
sly-u.5
for
101257960
vvi-u.5
for
100257069
vvi-u.5
for
100262177
ghi-r.1
for
107919012
bna-r.1
for
111204301
bna-r.1
for
111211070
bna-r.1
for
111211421
cit-r.1
for
102621878
nta-r.1
for
107761724
nta-r.1
for
107823631


Ortholog ID: 483
Species tae tae tae osa osa zma zma zma ath ath ath gma gma sly sly sly vvi vvi bna cit nta nta nta
Symbol LOC123167261 LOC123127312 LOC123160072 LOC4340103 LOC4340099 LOC100284055 LOC100284356 LOC542245 AT3G01270 AT5G15110 AT59 LOC100798579 LOC100810857 LAT59 LOC101260096 LOC101264694 LOC100257069 LOC100262177 LOC106416640 LOC102621878 LOC107761724 LOC107823631 LOC107788586
Function* pectate lyase pectate lyase pectate lyase pectate lyase pectate lyase uncharacterized LOC100284055 pectate lyase male gametophyte-specific 2 Pectate lyase family protein Pectate lyase family protein Pectate lyase family protein pectate lyase pectate lyase pectate lyase P59 probable pectate lyase P59 probable pectate lyase P59 pectate lyase pectate lyase probable pectate lyase 6 probable pectate lyase 19 putative pectate lyase P59 pectate lyase-like pectate lyase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 6
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 4
cit00460 Cyanoamino acid metabolism 3
cit00500 Starch and sucrose metabolism 3
cit00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 12
nta00053 Ascorbate and aldarate metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 13
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123167261 123127312 123160072 4340103 4340099 100284055 100284356 542245 821142 831363 838004 100798579 100810857 101253459 101260096 101264694 100257069 100262177 106416640 102621878 107761724 107823631 107788586
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