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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123169338   pentatricopeptide repeat-containing protein At4g13650 
 tae-r.2   123150725   pentatricopeptide repeat-containing protein At4g13650 
 tae-r.2   123157080   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 
 hvu-r.1   123410363   pentatricopeptide repeat-containing protein At4g13650-like 
 bdi-r.1   100832314   pentatricopeptide repeat-containing protein At4g13650 
 osa-u.5   4341090   pentatricopeptide repeat-containing protein At4g13650 

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Top 50 coexpressed genes to 123169338 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123169338 (tae-r.2 coexpression data)

CoexMap"123169338"


taeLOC123169338 | Entrez gene ID : 123169338    
Species tae hvu bdi osa sot vvi sly nta bna ath ppo zma cre mtr sbi gma bra ghi cit
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044443116.1 [sequence] [blastp]
XP_044443117.1 [sequence] [blastp]
XP_044443118.1 [sequence] [blastp]
XP_044443119.1 [sequence] [blastp]
XP_044443120.1 [sequence] [blastp]
XP_044443121.1 [sequence] [blastp]
XP_044443122.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443116.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443117.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443118.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443119.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443120.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443121.1)
chlo 4,  nucl 2,  cyto 1,  cysk 1  (predict for XP_044443122.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_044443116.1)
mito 7,  other 4  (predict for XP_044443117.1)
mito 7,  other 4  (predict for XP_044443118.1)
mito 7,  other 4  (predict for XP_044443119.1)
mito 7,  other 4  (predict for XP_044443120.1)
mito 7,  other 4  (predict for XP_044443121.1)
mito 7,  other 4  (predict for XP_044443122.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123169338
tae-r.2
for
123150725
tae-r.2
for
123157080
hvu-r.1
for
123410363
bdi-r.1
for
100832314
osa-u.5
for
4341090


Ortholog ID: 18396
Species tae tae tae hvu bdi osa
Symbol LOC123169338 LOC123150725 LOC123157080 LOC123410363 LOC100832314 LOC4341090
Function* pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At1g74600, chloroplastic pentatricopeptide repeat-containing protein At4g13650-like pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03020 RNA polymerase 2
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123169338 123150725 123157080 123410363 100832314 4341090
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