ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123170551	uncharacterized LOC123170551
tae-r.2	123070164	uncharacterized LOC123070164
tae-r.2	123061521	uncharacterized LOC123061521
tae-r.2	123078598	uncharacterized LOC123078598
hvu-r.1	123443909	uncharacterized LOC123443909
hvu-r.1	123407169	uncharacterized LOC123407169
bdi-r.1	100845094	uncharacterized LOC100845094
bdi-r.1	100836935	uncharacterized LOC100836935
osa-u.5	4341173	uncharacterized LOC4341173
osa-u.5	4328931	uncharacterized LOC4328931
zma-u.5	100217230	uncharacterized LOC100217230
zma-u.5	103635405	loricrin-like
zma-u.5	100383395	uncharacterized LOC100383395
sbi-r.1	8054403	uncharacterized LOC8054403
sbi-r.1	8079297	uncharacterized LOC8079297
sbi-r.1	8078359	uncharacterized LOC8078359
ath-u.5	AT1G64140	WRKY transcription factor
gma-u.5	100776565	uncharacterized LOC100776565
gma-u.5	100784837	uncharacterized LOC100784837
gma-u.5	100809074	uncharacterized LOC100809074
sly-u.5	101256504	uncharacterized LOC101256504
sly-u.5	101268782	uncharacterized LOC101268782
bra-r.6	103838232	uncharacterized LOC103838232
bra-r.6	103838138	uncharacterized LOC103838138
vvi-u.5	100248452	GDT1-like protein 1, chloroplastic
vvi-u.5	100241527	uncharacterized LOC100241527
ppo-u.5	7472731	uncharacterized LOC7472731
ppo-u.5	7497814	uncharacterized LOC7497814
mtr-u.5	25502133	uncharacterized LOC25502133
ghi-r.1	107951968	uncharacterized LOC107951968
ghi-r.1	107896465	uncharacterized LOC107896465
ghi-r.1	107890695	loricrin
bna-r.1	106452599	uncharacterized LOC106452599
bna-r.1	106382017	uncharacterized LOC106382017
bna-r.1	106382014	uncharacterized LOC106382014
sot-r.1	102605155	uncharacterized LOC102605155
sot-r.1	102589461	uncharacterized LOC102589461
cit-r.1	102631154	uncharacterized LOC102631154
nta-r.1	107821888	uncharacterized LOC107821888
nta-r.1	107790513	uncharacterized LOC107790513
nta-r.1	107761730	uncharacterized LOC107761730

Top 50 coexpressed genes to 123170551 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123170551 (tae-r.2 coexpression data)

CoexMap"123170551"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044444345.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, extr 1, vacu 1, chlo_mito 1

(predict for XP_044444345.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_044444345.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123170551	tae-r.2 for 123070164	tae-r.2 for 123061521	tae-r.2 for 123078598	hvu-r.1 for 123443909	hvu-r.1 for 123407169	bdi-r.1 for 100845094	bdi-r.1 for 100836935	osa-u.5 for 4341173	osa-u.5 for 4328931	zma-u.5 for 100217230	zma-u.5 for 103635405	zma-u.5 for 100383395	sbi-r.1 for 8054403	sbi-r.1 for 8079297	sbi-r.1 for 8078359	ath-u.5 for AT1G64140	gma-u.5 for 100776565	gma-u.5 for 100784837	gma-u.5 for 100809074	sly-u.5 for 101256504	sly-u.5 for 101268782	bra-r.6 for 103838232	bra-r.6 for 103838138	vvi-u.5 for 100248452	vvi-u.5 for 100241527	ppo-u.5 for 7472731	ppo-u.5 for 7497814	mtr-u.5 for 25502133	ghi-r.1 for 107951968	ghi-r.1 for 107896465	ghi-r.1 for 107890695	bna-r.1 for 106452599	bna-r.1 for 106382017	bna-r.1 for 106382014	sot-r.1 for 102605155	sot-r.1 for 102589461	cit-r.1 for 102631154	nta-r.1 for 107821888	nta-r.1 for 107790513	nta-r.1 for 107761730

Ortholog

Ortholog ID: 4012

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123061521

uncharacterized LOC123078598

uncharacterized LOC123148207

uncharacterized LOC123443909

uncharacterized LOC123407169

uncharacterized LOC100845094

uncharacterized LOC100836935

uncharacterized LOC4341173

uncharacterized LOC4328931

uncharacterized LOC100217230

loricrin-like

uncharacterized LOC100383395

uncharacterized LOC8054403

uncharacterized LOC8079297

uncharacterized LOC8078359

WRKY transcription factor

uncharacterized LOC100776565

uncharacterized LOC100784837

uncharacterized LOC100809074

uncharacterized LOC101256504

uncharacterized LOC101268782

uncharacterized LOC103838232

uncharacterized LOC103838138

GDT1-like protein 1, chloroplastic

uncharacterized LOC100241527

uncharacterized LOC7472731

uncharacterized LOC7497814

uncharacterized LOC25502133

uncharacterized LOC107951968

uncharacterized LOC107896465

loricrin

uncharacterized LOC106452599

uncharacterized LOC106382017

uncharacterized LOC106382014

uncharacterized LOC102605155

uncharacterized LOC102589461

uncharacterized LOC102631154

uncharacterized LOC107821888

uncharacterized LOC107761730

uncharacterized LOC107831715

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00330	Arginine and proline metabolism	3
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00330	Arginine and proline metabolism	3
tae00910	Nitrogen metabolism	3
tae01310	Nitrogen cycle	3
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	11
hvu00020	Citrate cycle (TCA cycle)	7
hvu00010	Glycolysis / Gluconeogenesis	6
hvu01210	2-Oxocarboxylic acid metabolism	5
hvu01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00380	Tryptophan metabolism	3
bdi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	4
zma00920	Sulfur metabolism	3
zma01320	Sulfur cycle	3
zma00480	Glutathione metabolism	2
zma00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00920	Sulfur metabolism	3
sbi01320	Sulfur cycle	3
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00220	Arginine biosynthesis	2
ppo00230	Purine metabolism	2
ppo01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5
bna00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	5
bna00330	Arginine and proline metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00920	Sulfur metabolism	4
sot01320	Sulfur cycle	4
sot01230	Biosynthesis of amino acids	3
sot00270	Cysteine and methionine metabolism	3
sot00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04141	Protein processing in endoplasmic reticulum	3
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

123061521

123078598

123148207

123443909

123407169

100845094

100836935

4341173

4328931

100217230

103635405

100383395

8054403

8079297

8078359

842718

100776565

100784837

100809074

101256504

101268782

103838232

103838138

100248452

100241527

7472731

7497814

25502133

107951968

107896465

107890695

106452599

106382017

106382014

102605155

102589461

102631154

107821888

107761730

107831715

The preparation time of this page was 0.3 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	3	3	1	3	2	2	2	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123170551 (tae-r.2 coexpression data)

Top 50 enrichment test to 123170551 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**