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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123183265   solanesyl-diphosphate synthase 2, chloroplastic 
 tae-r.2   123069734   solanesyl-diphosphate synthase 2, chloroplastic 
 hvu-r.1   123451941   solanesyl-diphosphate synthase 2, chloroplastic 
 bdi-r.1   100826224   solanesyl-diphosphate synthase 2, chloroplastic 
 bdi-r.1   100835146   probable solanesyl-diphosphate synthase 3, chloroplastic 
 osa-u.5   4351957   probable solanesyl-diphosphate synthase 3, chloroplastic 
 osa-u.5   9267741   solanesyl-diphosphate synthase 2, chloroplastic 
 zma-u.5   100282721   prenyl transferase 
 zma-u.5   100191875   Solanesyl diphosphate synthase 2 chloroplastic 
 sbi-r.1   8155346   probable solanesyl-diphosphate synthase 3, chloroplastic 
 ath-u.5   SPS2   solanesyl diphosphate synthase 2 
 ath-u.5   SPS1   solanesyl diphosphate synthase 1 
 gma-u.5   100805842   solanesyl diphosphate synthase 1, chloroplastic 
 gma-u.5   100783538   solanesyl diphosphate synthase 1, chloroplastic 
 sly-u.5   SppS   solanesyl diphosphate synthase 
 bra-r.6   103872491   solanesyl diphosphate synthase 2, chloroplastic 
 bra-r.6   103832329   solanesyl diphosphate synthase 1, chloroplastic 
 vvi-u.5   100246988   solanesyl diphosphate synthase 1, chloroplastic 
 ppo-u.5   7459128   solanesyl diphosphate synthase 1, chloroplastic 
 mtr-u.5   25487134   solanesyl diphosphate synthase 1, chloroplastic 
 ghi-r.1   107920469   solanesyl diphosphate synthase 1, chloroplastic 
 ghi-r.1   107895305   solanesyl diphosphate synthase 1, chloroplastic 
 bna-r.1   106365558   solanesyl diphosphate synthase 2, chloroplastic 
 bna-r.1   106354696   solanesyl diphosphate synthase 1, chloroplastic 
 bna-r.1   106354554   solanesyl diphosphate synthase 1, chloroplastic 
 sot-r.1   102593674   probable solanesyl-diphosphate synthase 3, chloroplastic 
 cit-r.1   102612772   solanesyl diphosphate synthase 2, chloroplastic 
 nta-r.1   107765960   solanesyl diphosphate synthase 2, chloroplastic-like 
 nta-r.1   107832641   probable solanesyl-diphosphate synthase 3, chloroplastic 
 cre-r.1   CHLRE_13g565650v5   uncharacterized protein 

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Top 50 coexpressed genes to 123183265 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123183265 (tae-r.2 coexpression data)

CoexMap"123183265"


taeLOC123183265 | Entrez gene ID : 123183265    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 2 2 2 1 2 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00900 [list] [network] Terpenoid backbone biosynthesis (187 genes)
GO BP
GO:0010236 [list] [network] plastoquinone biosynthetic process  (2 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (409 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (115 genes)  IEA  
Protein XP_044451972.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_044451972.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for XP_044451972.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123183265
tae-r.2
for
123069734
hvu-r.1
for
123451941
bdi-r.1
for
100826224
bdi-r.1
for
100835146
osa-u.5
for
4351957
osa-u.5
for
9267741
zma-u.5
for
100282721
zma-u.5
for
100191875
sbi-r.1
for
8155346
ath-u.5
for
SPS2
ath-u.5
for
SPS1
gma-u.5
for
100805842
gma-u.5
for
100783538
sly-u.5
for
SppS
bra-r.6
for
103872491
bra-r.6
for
103832329
vvi-u.5
for
100246988
ppo-u.5
for
7459128
mtr-u.5
for
25487134
ghi-r.1
for
107920469
ghi-r.1
for
107895305
bna-r.1
for
106365558
bna-r.1
for
106354696
bna-r.1
for
106354554
sot-r.1
for
102593674
cit-r.1
for
102612772
nta-r.1
for
107765960
nta-r.1
for
107832641
cre-r.1
for
CHLRE_13g565650v5


Ortholog ID: 7037
Species tae tae hvu bdi bdi osa osa zma zma sbi ath ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123183265 LOC123069734 LOC123451941 LOC100826224 LOC100835146 LOC4351957 LOC9267741 LOC100282721 LOC100191875 LOC8155346 SPS2 SPS1 LOC100805842 LOC100783538 SppS LOC103872491 LOC103832329 LOC100246988 LOC7459128 LOC25487134 LOC107920469 LOC107895305 LOC106365558 LOC106354696 LOC106354554 LOC102593674 LOC102612772 LOC107765960 LOC107832641 CHLRE_13g565650v5
Function* solanesyl-diphosphate synthase 2, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic solanesyl-diphosphate synthase 2, chloroplastic prenyl transferase Solanesyl diphosphate synthase 2 chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic solanesyl diphosphate synthase 2 solanesyl diphosphate synthase 1 solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 1, chloroplastic solanesyl diphosphate synthase 1, chloroplastic probable solanesyl-diphosphate synthase 3, chloroplastic solanesyl diphosphate synthase 2, chloroplastic solanesyl diphosphate synthase 2, chloroplastic-like probable solanesyl-diphosphate synthase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00562 Inositol phosphate metabolism 3
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 3
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa00260 Glycine, serine and threonine metabolism 3
osa00670 One carbon pool by folate 3
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01240 Biosynthesis of cofactors 3
osa00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath00900 Terpenoid backbone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath04712 Circadian rhythm - plant 2
ath00053 Ascorbate and aldarate metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00750 Vitamin B6 metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna04120 Ubiquitin mediated proteolysis 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 4
bna04712 Circadian rhythm - plant 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00900 Terpenoid backbone biosynthesis 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta04146 Peroxisome 3
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta04146 Peroxisome 3
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 4
cre00740 Riboflavin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123183265 123069734 123451941 100826224 100835146 4351957 9267741 100282721 100191875 8155346 838275 844187 100805842 100783538 101253007 103872491 103832329 100246988 7459128 25487134 107920469 107895305 106365558 106354696 106354554 102593674 102612772 107765960 107832641 5719046
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