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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123186874   polycomb group protein EMF2B 
 tae-r.2   123043029   polycomb group protein EMF2B 
 tae-r.2   123043012   polycomb group protein EMF2B 
 hvu-r.1   123452872   polycomb group protein EMF2B-like 
 hvu-r.1   123431440   polycomb group protein EMF2B-like 
 hvu-r.1   123431452   polycomb group protein EMF2B-like 
 bdi-r.1   100830135   polycomb group protein EMBRYONIC FLOWER 2 
 bdi-r.1   100829017   polycomb group protein EMBRYONIC FLOWER 2 
 osa-u.5   4346674   polycomb group protein EMF2B-like 
 osa-u.5   4335036   polycomb group protein EMF2A-like 
 zma-u.5   100274131   uncharacterized LOC100274131 
 zma-u.5   542512   VEF family protein 
 sbi-r.1   8066000   polycomb group protein EMBRYONIC FLOWER 2 
 sbi-r.1   110432499   polycomb group protein EMBRYONIC FLOWER 2-like 
 sbi-r.1   8086238   polycomb group protein EMBRYONIC FLOWER 2 
 ath-u.5   EMF2   VEFS-Box of polycomb protein 
 gma-u.5   100807112   polycomb group protein EMBRYONIC FLOWER 2 
 gma-u.5   100815591   polycomb group protein EMBRYONIC FLOWER 2 
 sly-u.5   EMF2   polycomb group protein EMBRYONIC FLOWER 2 
 bra-r.6   103852160   polycomb group protein EMBRYONIC FLOWER 2 
 bra-r.6   103844382   polycomb group protein EMBRYONIC FLOWER 2 
 bra-r.6   103844380   polycomb group protein EMBRYONIC FLOWER 2 
 vvi-u.5   100252876   polycomb group protein EMBRYONIC FLOWER 2 
 vvi-u.5   100245153   polycomb group protein EMBRYONIC FLOWER 2 
 ppo-u.5   7461995   polycomb group protein EMBRYONIC FLOWER 2 
 ppo-u.5   7491491   polycomb group protein EMBRYONIC FLOWER 2 
 ppo-u.5   18097071   polycomb group protein EMBRYONIC FLOWER 2 
 mtr-u.5   11409082   polycomb group protein EMBRYONIC FLOWER 2 
 mtr-u.5   11438436   polycomb group protein EMF2B 
 ghi-r.1   107947336   polycomb group protein EMBRYONIC FLOWER 2 
 ghi-r.1   107953615   polycomb group protein EMBRYONIC FLOWER 2 
 ghi-r.1   107949681   polycomb group protein EMBRYONIC FLOWER 2 
 bna-r.1   125585430   polycomb group protein EMBRYONIC FLOWER 2-like 
 bna-r.1   106415498   polycomb group protein VERNALIZATION 2 
 sot-r.1   102603577   polycomb group protein EMBRYONIC FLOWER 2 
 cit-r.1   102611081   polycomb group protein EMBRYONIC FLOWER 2 
 cit-r.1   102627407   polycomb group protein EMBRYONIC FLOWER 2 
 nta-r.1   107829159   polycomb group protein EMBRYONIC FLOWER 2-like 
 nta-r.1   107804934   polycomb group protein EMBRYONIC FLOWER 2 
 nta-r.1   107788047   polycomb group protein EMBRYONIC FLOWER 2 
 cre-r.1   CHLRE_10g456800v5   uncharacterized protein 
 cre-r.1   CHLRE_16g695400v5   uncharacterized protein 

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Top 50 coexpressed genes to 123186874 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123186874 (tae-r.2 coexpression data)

CoexMap"123186874"


taeLOC123186874 | Entrez gene ID : 123186874    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 2 2 3 1 2 1 3 2 3 2 3 2 1 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (130 genes)  IEA  
Protein XP_044454479.1 [sequence] [blastp]
XP_044454480.1 [sequence] [blastp]
XP_044454481.1 [sequence] [blastp]
XP_044454482.1 [sequence] [blastp]
XP_044454483.1 [sequence] [blastp]
XP_044454484.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cysk 1  (predict for XP_044454479.1)
nucl 9,  cysk 1  (predict for XP_044454480.1)
nucl 9  (predict for XP_044454481.1)
chlo 6,  nucl 4  (predict for XP_044454482.1)
chlo 6,  nucl 4  (predict for XP_044454483.1)
nucl 8,  cysk 1  (predict for XP_044454484.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044454479.1)
other 9  (predict for XP_044454480.1)
other 9  (predict for XP_044454481.1)
other 3  (predict for XP_044454482.1)
other 3  (predict for XP_044454483.1)
other 9  (predict for XP_044454484.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123186874
tae-r.2
for
123043029
tae-r.2
for
123043012
hvu-r.1
for
123452872
hvu-r.1
for
123431440
hvu-r.1
for
123431452
bdi-r.1
for
100830135
bdi-r.1
for
100829017
osa-u.5
for
4346674
osa-u.5
for
4335036
zma-u.5
for
100274131
zma-u.5
for
542512
sbi-r.1
for
8066000
sbi-r.1
for
110432499
sbi-r.1
for
8086238
ath-u.5
for
EMF2
gma-u.5
for
100807112
gma-u.5
for
100815591
sly-u.5
for
EMF2
bra-r.6
for
103852160
bra-r.6
for
103844382
bra-r.6
for
103844380
vvi-u.5
for
100252876
vvi-u.5
for
100245153
ppo-u.5
for
7461995
ppo-u.5
for
7491491
ppo-u.5
for
18097071
mtr-u.5
for
11409082
mtr-u.5
for
11438436
ghi-r.1
for
107947336
ghi-r.1
for
107953615
ghi-r.1
for
107949681
bna-r.1
for
125585430
bna-r.1
for
106415498
sot-r.1
for
102603577
cit-r.1
for
102611081
cit-r.1
for
102627407
nta-r.1
for
107829159
nta-r.1
for
107804934
nta-r.1
for
107788047
cre-r.1
for
CHLRE_10g456800v5
cre-r.1
for
CHLRE_16g695400v5


Ortholog ID: 1339
Species tae hvu hvu hvu bdi bdi osa osa zma zma sbi sbi sbi ath ath gma gma sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna sot cit cit nta nta nta cre cre
Symbol LOC123121170 LOC123452872 LOC123431440 LOC123431452 LOC100830135 LOC100829017 LOC4346674 LOC4335036 LOC100274131 LOC542512 LOC8066000 LOC110432499 LOC8086238 EMF2 VRN2 LOC100816782 LOC100798991 EMF2 LOC103844382 LOC103844380 LOC103838272 LOC100252876 LOC100245153 LOC7461995 LOC7491491 LOC18097071 LOC11409082 LOC11438436 LOC107947336 LOC107949681 LOC107933743 LOC125585430 LOC106406417 LOC102603577 LOC102611081 LOC102627407 LOC107804934 LOC107788047 LOC107762027 CHLRE_10g456800v5 CHLRE_16g695400v5
Function* polycomb group protein EMF2B polycomb group protein EMF2B-like polycomb group protein EMF2B-like polycomb group protein EMF2B-like polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMF2B-like polycomb group protein EMF2A-like uncharacterized LOC100274131 VEF family protein polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2-like polycomb group protein EMBRYONIC FLOWER 2 VEFS-Box of polycomb protein VEFS-Box of polycomb protein polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 uncharacterized LOC103838272 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMF2B polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2-like polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 polycomb group protein EMBRYONIC FLOWER 2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi01240 Biosynthesis of cofactors 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna04382 Cornified envelope formation 4
bna03440 Homologous recombination 2
bna03015 mRNA surveillance pathway 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 4
bna03015 mRNA surveillance pathway 2
bna00511 Other glycan degradation 2
bna00600 Sphingolipid metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 2
nta00410 beta-Alanine metabolism 2
nta00562 Inositol phosphate metabolism 2
nta00640 Propanoate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123121170 123452872 123431440 123431452 100830135 100829017 4346674 4335036 100274131 542512 8066000 110432499 8086238 835198 827392 100816782 100798991 100134887 103844382 103844380 103838272 100252876 100245153 7461995 7491491 18097071 11409082 11438436 107947336 107949681 107933743 125585430 106406417 102603577 102611081 102627407 107804934 107788047 107762027 66055120 66056855
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