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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123189518   copper methylamine oxidase 
 osa-u.5   4336153   amine oxidase [copper-containing] zeta, peroxisomal 
 zma-u.5   100383438   uncharacterized LOC100383438 
 ath-u.5   AT2G42490   Copper amine oxidase family protein 
 gma-u.5   PAO1   peroxisomal copper-containing amine oxidase 
 gma-u.5   100778802   copper methylamine oxidase 
 gma-u.5   100783091   copper methylamine oxidase 
 sly-u.5   101253199   diamine oxidase [copper-containing] 1, peroxisomal-like 
 sly-u.5   101254319   diamine oxidase [copper-containing] 1, peroxisomal 
 sly-u.5   101266123   amine oxidase [copper-containing] zeta, peroxisomal 
 vvi-u.5   100249520   amine oxidase [copper-containing] zeta, peroxisomal 
 vvi-u.5   100267280   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7492380   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7453796   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7458050   diamine oxidase [copper-containing] 1, peroxisomal 
 mtr-u.5   25501447   copper methylamine oxidase 
 mtr-u.5   11413114   copper methylamine oxidase 
 mtr-u.5   11416558   copper methylamine oxidase 

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Top 50 coexpressed genes to 123189518 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123189518 (tae-r.2 coexpression data)

CoexMap"123189518"


taeLOC123189518 | Entrez gene ID : 123189518    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 1 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00260 [list] [network] Glycine, serine and threonine metabolism (218 genes)
taes00350 [list] [network] Tyrosine metabolism (174 genes)
taes00360 [list] [network] Phenylalanine metabolism (177 genes)
taes00410 [list] [network] beta-Alanine metabolism (129 genes)
taes00950 [list] [network] Isoquinoline alkaloid biosynthesis (101 genes)
taes00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (97 genes)
GO BP
GO:0009308 [list] [network] amine metabolic process  (290 genes)  IEA  
GO CC
GO MF
GO:0008131 [list] [network] primary methylamine oxidase activity  (14 genes)  IEA  
GO:0048038 [list] [network] quinone binding  (36 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (212 genes)  IEA  
Protein XP_044457879.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  cyto 3,  nucl 2,  cyto_plas 2  (predict for XP_044457879.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_044457879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123189518

.
osa-u.5
for
4336153

.
zma-u.5
for
100383438

.
ath-u.5
for
AT2G42490

.
gma-u.5
for
PAO1

.
gma-u.5
for
100778802

.
gma-u.5
for
100783091

.
sly-u.5
for
101253199

.
sly-u.5
for
101254319

.
sly-u.5
for
101266123

.
vvi-u.5
for
100249520

.
vvi-u.5
for
100267280

.
ppo-u.5
for
7492380

.
ppo-u.5
for
7453796

.
ppo-u.5
for
7458050

.
mtr-u.5
for
25501447

.
mtr-u.5
for
11413114

.
mtr-u.5
for
11416558

.


Ortholog ID: 2890
Species ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre cre sbi sbi sot cit cit bdi nta nta
Symbol AT2G42490 LOC100798722 LOC100817454 LOC101253199 LOC101254319 LOC4336153 LOC100383438 LOC103865952 LOC103858017 LOC100267280 LOC100249520 LOC7458050 LOC7492380 LOC25501447 LOC11413114 LOC123189518 LOC123130639 LOC123426997 LOC107946240 LOC107949638 LOC106428169 LOC106388276 CHLRE_09g402515v5 CHLRE_01g000650v5 LOC8063333 LOC8073581 LOC102580758 LOC102610710 LOC102618241 LOC100837848 LOC107778057 LOC107795029
Function* Copper amine oxidase family protein copper methylamine oxidase copper methylamine oxidase diamine oxidase [copper-containing] 1, peroxisomal-like diamine oxidase [copper-containing] 1, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal uncharacterized LOC100383438 copper methylamine oxidase copper methylamine oxidase amine oxidase [copper-containing] zeta, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal diamine oxidase [copper-containing] 1, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase-like copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase-like copper methylamine oxidase uncharacterized protein uncharacterized protein copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase-like amine oxidase [copper-containing] zeta, peroxisomal-like amine oxidase [copper-containing] zeta, peroxisomal copper methylamine oxidase amine oxidase [copper-containing] zeta, peroxisomal-like diamine oxidase [copper-containing] 1, peroxisomal-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
sly00940 Phenylpropanoid biosynthesis 3
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00280 Valine, leucine and isoleucine degradation 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma04146 Peroxisome 2
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 3
vvi00410 beta-Alanine metabolism 2
vvi04016 MAPK signaling pathway - plant 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 4
ppo00260 Glycine, serine and threonine metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03050 Proteasome 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00260 Glycine, serine and threonine metabolism 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00260 Glycine, serine and threonine metabolism 2
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00260 Glycine, serine and threonine metabolism 6
tae01200 Carbon metabolism 6
tae00280 Valine, leucine and isoleucine degradation 4
tae01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00350 Tyrosine metabolism 3
tae00360 Phenylalanine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04016 MAPK signaling pathway - plant 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04626 Plant-pathogen interaction 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
ghi00410 beta-Alanine metabolism 3
ghi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00410 beta-Alanine metabolism 4
bna00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00410 beta-Alanine metabolism 4
bna00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
sbi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
sbi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00410 beta-Alanine metabolism 2
cit00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00410 beta-Alanine metabolism 2
cit00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 6
nta01212 Fatty acid metabolism 6
nta00592 alpha-Linolenic acid metabolism 4
nta04136 Autophagy - other 3
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
nta00950 Isoquinoline alkaloid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818849 100798722 100817454 101253199 101254319 4336153 100383438 103865952 103858017 100267280 100249520 7458050 7492380 25501447 11413114 123189518 123130639 123426997 107946240 107949638 106428169 106388276 5723185 5725910 8063333 8073581 102580758 102610710 102618241 100837848 107778057 107795029
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