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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123191092   uncharacterized LOC123191092 
 tae-r.2   123191099   multiple RNA-binding domain-containing protein 1 
 tae-r.2   123191093   multiple RNA-binding domain-containing protein 1 
 tae-r.2   123055263   polyadenylate-binding protein 4 
 hvu-r.1   123428453   uncharacterized LOC123428453 
 bdi-r.1   100845138   probable RNA-binding protein 19 
 osa-u.5   4337438   uncharacterized LOC4337438 
 sbi-r.1   8076483   multiple RNA-binding domain-containing protein 1 

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Top 50 coexpressed genes to 123191092 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123191092 (tae-r.2 coexpression data)

CoexMap"123191092"


taeLOC123191092 | Entrez gene ID : 123191092    
Species tae hvu bdi osa sbi sot vvi sly nta bna ppo zma cre mtr ath gma bra ghi cit
Paralog 4 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03015 [list] [network] mRNA surveillance pathway (388 genes)
taes03018 [list] [network] RNA degradation (374 genes)
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (54 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (303 genes)  IEA  
GO:1990904 [list] [network] ribonucleoprotein complex  (1478 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
Protein XP_044459799.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1  (predict for XP_044459799.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044459799.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123191092
tae-r.2
for
123191099
tae-r.2
for
123191093
tae-r.2
for
123055263
hvu-r.1
for
123428453
bdi-r.1
for
100845138
osa-u.5
for
4337438
sbi-r.1
for
8076483


Ortholog ID: 14163
Species tae tae hvu bdi osa sbi
Symbol LOC123047456 LOC123047455 LOC123428453 LOC100845138 LOC4337438 LOC8076483
Function* uncharacterized LOC123047456 uncharacterized LOC123047455 uncharacterized LOC123428453 probable RNA-binding protein 19 uncharacterized LOC4337438 multiple RNA-binding domain-containing protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 7
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 8
tae03015 mRNA surveillance pathway 5
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00260 Glycine, serine and threonine metabolism 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi00270 Cysteine and methionine metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123047456 123047455 123428453 100845138 4337438 8076483
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