ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123401304	polyubiquitin
hvu-r.1	123401164	polyubiquitin
hvu-r.1	123401278	polyubiquitin
hvu-r.1	123401361	polyubiquitin 11
tae-r.2	123046348	polyubiquitin
tae-r.2	123132008	polyubiquitin
tae-r.2	123136238	polyubiquitin
bdi-r.1	104581271	polyubiquitin 3
bdi-r.1	100835540	polyubiquitin 11
bdi-r.1	104585556	polyubiquitin
osa-u.5	9272016	polyubiquitin
osa-u.5	4328390	polyubiquitin
osa-u.5	4341860	polyubiquitin
zma-u.5	103626648	polyubiquitin
zma-u.5	542322	polyubiquitin
zma-u.5	100282068	uncharacterized LOC100282068
sbi-r.1	8079792	polyubiquitin
sbi-r.1	8073180	polyubiquitin
sbi-r.1	8063786	polyubiquitin
ath-u.5	UBQ13	ubiquitin 13
gma-u.5	100817214	polyubiquitin
gma-u.5	100815545	polyubiquitin 3
gma-u.5	100800638	polyubiquitin 11
sly-u.5	ubq1-1	ubiquitin
sly-u.5	101258282	polyubiquitin
sly-u.5	101256039	polyubiquitin
bra-r.6	103839755	polyubiquitin
bra-r.6	103874046	polyubiquitin
bra-r.6	103869289	polyubiquitin 11
vvi-u.5	100267431	polyubiquitin
vvi-u.5	100259635	uncharacterized LOC100259635
vvi-u.5	100252768	polyubiquitin 4
ppo-u.5	18106976	polyubiquitin
ppo-u.5	7480065	polyubiquitin
ppo-u.5	7485436	polyubiquitin 11
mtr-u.5	25492931	polyubiquitin
mtr-u.5	25493109	polyubiquitin-A-like
mtr-u.5	25501783	polyubiquitin 4
ghi-r.1	107928641	polyubiquitin
ghi-r.1	107925174	polyubiquitin
ghi-r.1	107922157	polyubiquitin
bna-r.1	125574778	polyubiquitin-like
bna-r.1	106349084	polyubiquitin 11
bna-r.1	106348160	polyubiquitin
sot-r.1	102586619	polyubiquitin-like
sot-r.1	102599865	polyubiquitin
sot-r.1	102587932	polyubiquitin
cit-r.1	102618061	polyubiquitin 11
cit-r.1	102629380	polyubiquitin
cit-r.1	102622806	polyubiquitin-like
nta-r.1	107762509	polyubiquitin 11
nta-r.1	107766655	polyubiquitin
nta-r.1	107761578	polyubiquitin-like
cre-r.1	CHLRE_11g467567v5	uncharacterized protein

Top 50 coexpressed genes to 123401304 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123401304 (hvu-r.1 coexpression data)

CoexMap"123401304"

[Cytoscape]

Annotation

functional annotation

KEGG

hvg04120 [list] [network] Ubiquitin mediated proteolysis (227 genes)

GO BP

GO:0019941 [list] [network] modification-dependent protein catabolic process	(384 genes)	IEA
GO:0016567 [list] [network] protein ubiquitination	(478 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(3241 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5514 genes)	IEA

GO MF

GO:0031386 [list] [network] protein tag activity	(57 genes)	IEA
GO:0031625 [list] [network] ubiquitin protein ligase binding	(63 genes)	IEA

Protein

XP_044951014.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, cyto_nucl 5, chlo 1, nucl 1

(predict for XP_044951014.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044951014.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123401304	hvu-r.1 for 123401164	hvu-r.1 for 123401278	hvu-r.1 for 123401361	tae-r.2 for 123046348	tae-r.2 for 123132008	tae-r.2 for 123136238	bdi-r.1 for 104581271	bdi-r.1 for 100835540	bdi-r.1 for 104585556	osa-u.5 for 9272016	osa-u.5 for 4328390	osa-u.5 for 4341860	zma-u.5 for 103626648	zma-u.5 for 542322	zma-u.5 for 100282068	sbi-r.1 for 8079792	sbi-r.1 for 8073180	sbi-r.1 for 8063786	ath-u.5 for UBQ13	gma-u.5 for 100817214	gma-u.5 for 100815545	gma-u.5 for 100800638	sly-u.5 for ubq1-1	sly-u.5 for 101258282	sly-u.5 for 101256039	bra-r.6 for 103839755	bra-r.6 for 103874046	bra-r.6 for 103869289	vvi-u.5 for 100267431	vvi-u.5 for 100259635	vvi-u.5 for 100252768	ppo-u.5 for 18106976	ppo-u.5 for 7480065	ppo-u.5 for 7485436	mtr-u.5 for 25492931	mtr-u.5 for 25493109	mtr-u.5 for 25501783	ghi-r.1 for 107928641	ghi-r.1 for 107925174	ghi-r.1 for 107922157	bna-r.1 for 125574778	bna-r.1 for 106349084	bna-r.1 for 106348160	sot-r.1 for 102586619	sot-r.1 for 102599865	sot-r.1 for 102587932	cit-r.1 for 102618061	cit-r.1 for 102629380	cit-r.1 for 102622806	nta-r.1 for 107762509	nta-r.1 for 107766655	nta-r.1 for 107761578	cre-r.1 for CHLRE_11g467567v5

Ortholog

Ortholog ID: 257

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

UBQ13

UBQ3

UBQ10

LOC100817214

LOC100791065

SUBI-2

ubq1-1

Function^*

polyubiquitin

polyubiquitin 11

polyubiquitin

polyubiquitin 11

polyubiquitin 3

polyubiquitin

polyubiquitin 3-like

polyubiquitin

uncharacterized LOC100282068

polyubiquitin

ubiquitin 13

polyubiquitin 3

polyubiquitin 10

polyubiquitin

ubiquitin

polyubiquitin

polyubiquitin 11

polyubiquitin

uncharacterized LOC100259635

polyubiquitin 4

polyubiquitin

polyubiquitin 11

polyubiquitin

polyubiquitin 4

polyubiquitin

polyubiquitin 11

polyubiquitin

polyubiquitin 11

polyubiquitin

polyubiquitin-like

polyubiquitin

polyubiquitin-like

uncharacterized LOC102627936

polyubiquitin

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	8
hvu00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	7
hvu00940	Phenylpropanoid biosynthesis	3
hvu00250	Alanine, aspartate and glutamate metabolism	2
hvu00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	5
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	9
bdi03010	Ribosome	3
bdi03083	Polycomb repressive complex	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	3
osa04141	Protein processing in endoplasmic reticulum	2
osa03015	mRNA surveillance pathway	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa04120	Ubiquitin mediated proteolysis	3
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00250	Alanine, aspartate and glutamate metabolism	2
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5
sbi00030	Pentose phosphate pathway	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	7
gma04141	Protein processing in endoplasmic reticulum	6
gma03040	Spliceosome	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	6
gma04141	Protein processing in endoplasmic reticulum	4
gma03040	Spliceosome	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly04120	Ubiquitin mediated proteolysis	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04120	Ubiquitin mediated proteolysis	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi00500	Starch and sucrose metabolism	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2
ppo00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ppo00350	Tyrosine metabolism	2
ppo00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2
ghi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4
cre04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

123401278

123406377

123143946

123143944

123143945

104581271

104585556

100831055

4328390

4341860

4337080

103626648

542322

100282068

8063786

110430987

8076096

842845

831899

825880

100817214

100791065

114515510

101267758

101258282

101256039

103839755

103839752

103838224

100267431

100259635

100252768

7480065

7479088

18095912

25501783

11421243

11431263

107919923

107918137

107899654

106349084

106369026

106372626

102586619

102599865

102587932

102629380

102622806

102627936

107782949

107786552

107788853

5726921

The preparation time of this page was 0.1 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	1	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123401304 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123401304 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**