ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123406926	probable serine/threonine-protein kinase SIS8
osa-u.5	4340578	probable serine/threonine-protein kinase SIS8
osa-u.5	4330701	probable serine/threonine-protein kinase SIS8
zma-u.5	103637825	probable serine/threonine-protein kinase SIS8
zma-u.5	103627717	probable serine/threonine-protein kinase SIS8
ath-u.5	AT1G18160	Protein kinase superfamily protein
ath-u.5	AT1G73660	protein tyrosine kinase family protein
gma-u.5	100788742	probable serine/threonine-protein kinase SIS8
gma-u.5	100816332	probable serine/threonine-protein kinase SIS8
gma-u.5	100780884	probable serine/threonine-protein kinase SIS8
sly-u.5	101263689	probable serine/threonine-protein kinase SIS8
sly-u.5	101245854	probable serine/threonine-protein kinase SIS8
vvi-u.5	100854850	probable serine/threonine-protein kinase SIS8
ppo-u.5	7493495	probable serine/threonine-protein kinase SIS8
ppo-u.5	7474818	probable serine/threonine-protein kinase SIS8
mtr-u.5	25496747	probable serine/threonine-protein kinase SIS8
mtr-u.5	11408119	probable serine/threonine-protein kinase SIS8

Top 50 coexpressed genes to 123406926 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123406926 (hvu-r.1 coexpression data)

CoexMap"123406926"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1478 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(1519 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2546 genes)	IEA

Protein

XP_044955877.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, E.R. 3, cyto_plas 3, nucl 1, mito 1, pero 1

(predict for XP_044955877.1)

Subcellular
localization
TargetP

chlo 5, other 5

(predict for XP_044955877.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123406926	osa-u.5 for 4340578	osa-u.5 for 4330701	zma-u.5 for 103637825	zma-u.5 for 103627717	ath-u.5 for AT1G18160	ath-u.5 for AT1G73660	gma-u.5 for 100788742	gma-u.5 for 100816332	gma-u.5 for 100780884	sly-u.5 for 101263689	sly-u.5 for 101245854	vvi-u.5 for 100854850	ppo-u.5 for 7493495	ppo-u.5 for 7474818	mtr-u.5 for 25496747	mtr-u.5 for 11408119

Ortholog

Ortholog ID: 3999

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

probable serine/threonine-protein kinase SIS8

serine/threonine-protein kinase EDR1

protein tyrosine kinase family protein

Protein kinase superfamily protein

probable serine/threonine-protein kinase SIS8

serine/threonine-protein kinase EDR1-like

probable serine/threonine-protein kinase SIS8

putative serine/threonine-protein kinase SIS8

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	2
tae04070	Phosphatidylinositol signaling system	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma03250	Viral life cycle - HIV-1	2
zma00620	Pyruvate metabolism	2
zma00710	Carbon fixation by Calvin cycle	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	4
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2
ath00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3
sly00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	2
sly00270	Cysteine and methionine metabolism	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00562	Inositol phosphate metabolism	2
bra04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00541	Biosynthesis of various nucleotide sugars	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	6
mtr04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	4
bna04382	Cornified envelope formation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta03015	mRNA surveillance pathway	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta00562	Inositol phosphate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123400973

123406926

123145505

123128388

100831321

100836772

4340578

4330701

103637825

103627717

8068590

8065535

843701

838395

100788742

100780884

101263689

101245854

103831842

103872583

100854850

7493495

7474818

25496747

11408119

107941467

107931016

106354294

106346891

102581817

102586582

102617147

107819304

107793969

The preparation time of this page was 0.1 [sec].


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	3	2	1	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123406926 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123406926 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**