ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123425559	bifunctional protein FolD 2
hvu-r.1	123452101	bifunctional protein FolD 1, mitochondrial-like
hvu-r.1	123402225	bifunctional protein FolD 4, chloroplastic
tae-r.2	123180526	bifunctional protein FolD 2
tae-r.2	123191382	bifunctional protein FolD 2
tae-r.2	123103510	bifunctional protein FolD 1, mitochondrial
bdi-r.1	100830842	bifunctional protein FolD 4, chloroplastic
bdi-r.1	100823925	bifunctional protein FolD 1, mitochondrial
bdi-r.1	100831025	bifunctional protein FolD 2
osa-u.5	4337829	bifunctional protein FolD 2
osa-u.5	4346746	bifunctional protein FolD 1, mitochondrial
osa-u.5	4328117	bifunctional protein FolD 4, chloroplastic
zma-u.5	100272563	uncharacterized LOC100272563
zma-u.5	542656	bifunctional protein FolD 4, chloroplastic
zma-u.5	100216752	uncharacterized LOC100216752
sbi-r.1	8054570	bifunctional protein FolD 1, mitochondrial
sbi-r.1	8069506	bifunctional protein FolD 2
sbi-r.1	8068256	bifunctional protein FolD 4, chloroplastic
ath-u.5	AT2G38660	Amino acid dehydrogenase family protein
ath-u.5	AT3G12290	Amino acid dehydrogenase family protein
gma-u.5	100791604	bifunctional protein FolD 1, mitochondrial
gma-u.5	100797215	bifunctional protein FolD-like
gma-u.5	100819231	bifunctional protein FolD-like
sly-u.5	101245680	bifunctional protein FolD 1, mitochondrial
sly-u.5	101249506	bifunctional protein FolD 2
sly-u.5	101258003	bifunctional protein FolD 4, chloroplastic
bra-r.6	103870259	bifunctional protein FolD 2
bra-r.6	103865677	bifunctional protein FolD 1, mitochondrial
bra-r.6	103859439	bifunctional protein FolD 2
vvi-u.5	100255621	bifunctional protein FolD 2
vvi-u.5	100249948	bifunctional protein FolD 4, chloroplastic
ppo-u.5	112329146	bifunctional protein FolD 2
ppo-u.5	18100049	bifunctional protein FolD 1, mitochondrial
ppo-u.5	7494065	bifunctional protein FolD 4, chloroplastic
mtr-u.5	11435275	bifunctional protein FolD 2
mtr-u.5	11415327	bifunctional protein FolD 1, mitochondrial
ghi-r.1	107915702	bifunctional protein FolD 4, chloroplastic
ghi-r.1	121203067	bifunctional protein FolD 4, chloroplastic-like
ghi-r.1	121224611	bifunctional protein FolD 2
bna-r.1	106400759	bifunctional protein FolD 2
bna-r.1	106447678	bifunctional protein FolD 1, mitochondrial
bna-r.1	106435403	bifunctional protein FolD 2
sot-r.1	102582792	bifunctional protein FolD 4, chloroplastic
sot-r.1	102578570	bifunctional protein FolD 1, mitochondrial-like
sot-r.1	102585419	bifunctional protein FolD 2
cit-r.1	127901245	bifunctional protein FolD 4, chloroplastic-like
cit-r.1	102612232	bifunctional protein FolD 4, chloroplastic
cit-r.1	102625176	bifunctional protein FolD 1, mitochondrial
nta-r.1	107829089	bifunctional protein FolD 4, chloroplastic
nta-r.1	107810393	bifunctional protein FolD 4, chloroplastic-like
nta-r.1	107764705	bifunctional protein FolD 2-like
cre-r.1	CHLRE_03g182450v5	uncharacterized protein
cre-r.1	CHLRE_17g698450v5	uncharacterized protein

Top 50 coexpressed genes to 123425559 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123425559 (hvu-r.1 coexpression data)

CoexMap"123425559"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0035999 [list] [network] tetrahydrofolate interconversion

(13 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol

(938 genes)

IEA

GO MF

GO:0004477 [list] [network] methenyltetrahydrofolate cyclohydrolase activity	(3 genes)	IEA
GO:0004488 [list] [network] methylenetetrahydrofolate dehydrogenase (NADP+) activity	(4 genes)	IEA

Protein

XP_044965187.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 2, plas 2, cyto_plas 2

(predict for XP_044965187.1)

Subcellular
localization
TargetP

other 5

(predict for XP_044965187.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123425559	hvu-r.1 for 123452101	hvu-r.1 for 123402225	tae-r.2 for 123180526	tae-r.2 for 123191382	tae-r.2 for 123103510	bdi-r.1 for 100830842	bdi-r.1 for 100823925	bdi-r.1 for 100831025	osa-u.5 for 4337829	osa-u.5 for 4346746	osa-u.5 for 4328117	zma-u.5 for 100272563	zma-u.5 for 542656	zma-u.5 for 100216752	sbi-r.1 for 8054570	sbi-r.1 for 8069506	sbi-r.1 for 8068256	ath-u.5 for AT2G38660	ath-u.5 for AT3G12290	gma-u.5 for 100791604	gma-u.5 for 100797215	gma-u.5 for 100819231	sly-u.5 for 101245680	sly-u.5 for 101249506	sly-u.5 for 101258003	bra-r.6 for 103870259	bra-r.6 for 103865677	bra-r.6 for 103859439	vvi-u.5 for 100255621	vvi-u.5 for 100249948	ppo-u.5 for 112329146	ppo-u.5 for 18100049	ppo-u.5 for 7494065	mtr-u.5 for 11435275	mtr-u.5 for 11415327	ghi-r.1 for 107915702	ghi-r.1 for 121203067	ghi-r.1 for 121224611	bna-r.1 for 106400759	bna-r.1 for 106447678	bna-r.1 for 106435403	sot-r.1 for 102582792	sot-r.1 for 102578570	sot-r.1 for 102585419	cit-r.1 for 127901245	cit-r.1 for 102612232	cit-r.1 for 102625176	nta-r.1 for 107829089	nta-r.1 for 107810393	nta-r.1 for 107764705	cre-r.1 for CHLRE_03g182450v5	cre-r.1 for CHLRE_17g698450v5

Ortholog

Ortholog ID: 1197

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

bifunctional protein FolD 2

bifunctional protein FolD 1, mitochondrial-like