ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123427173	putative adenylate cyclase regulatory protein
hvu-r.1	123402701	F-box/LRR-repeat protein 14-like
tae-r.2	123045954	putative adenylate cyclase regulatory protein
tae-r.2	123053821	putative adenylate cyclase regulatory protein
tae-r.2	123127784	LRR receptor-like serine/threonine-protein kinase FLS2
bdi-r.1	100824516	F-box/LRR-repeat protein 14
bdi-r.1	100826929	leucine-rich repeat-containing G-protein coupled receptor 4
osa-u.5	4329969	uncharacterized LOC4329969
osa-u.5	4336323	uncharacterized LOC4336323
zma-u.5	100280910	regulatory subunit
zma-u.5	100273563	uncharacterized LOC100273563
sbi-r.1	8075897	F-box/LRR-repeat protein 14
sbi-r.1	110434682	F-box/LRR-repeat protein 14-like
ath-u.5	AT1G15740	Leucine-rich repeat family protein
gma-u.5	100800666	internalin A
gma-u.5	100795219	dynein regulatory complex subunit 6
gma-u.5	100790802	F-box/LRR-repeat protein 14
sly-u.5	101260523	uncharacterized LOC101260523
sly-u.5	101256686	uncharacterized LOC101256686
bra-r.6	103872360	F-box/LRR-repeat protein 14
vvi-u.5	100265253	uncharacterized LOC100265253
vvi-u.5	100243795	uncharacterized LOC100243795
ppo-u.5	7474690	uncharacterized LOC7474690
mtr-u.5	11418699	F-box/LRR-repeat protein 14
mtr-u.5	11445492	F-box/LRR-repeat protein 3
ghi-r.1	107897286	F-box/LRR-repeat protein 14
ghi-r.1	107914145	F-box/LRR-repeat protein 14
ghi-r.1	107917721	leucine-rich repeat-containing G-protein coupled receptor 4
bna-r.1	106346642	F-box/LRR-repeat protein 14
bna-r.1	106396441	F-box/LRR-repeat protein 14
sot-r.1	102583019	F-box/LRR-repeat protein 14-like
sot-r.1	102581359	F-box/LRR-repeat protein 14
cit-r.1	102630409	uncharacterized LOC102630409
cit-r.1	102609559	uncharacterized LOC102609559
nta-r.1	107776078	uncharacterized LOC107776078
nta-r.1	107779812	uncharacterized LOC107779812
nta-r.1	107812483	uncharacterized LOC107812483
cre-r.1	CHLRE_11g467559v5	uncharacterized protein
cre-r.1	CHLRE_03g188100v5	uncharacterized protein

Top 50 coexpressed genes to 123427173 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123427173 (hvu-r.1 coexpression data)

CoexMap"123427173"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

(90 genes)

IEA

GO CC

GO:0019005 [list] [network] SCF ubiquitin ligase complex

(48 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(4692 genes)

IEA

Protein

XP_044967082.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, nucl 2, cyto 2, cyto_nucl 2

(predict for XP_044967082.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_044967082.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123427173	hvu-r.1 for 123402701	tae-r.2 for 123045954	tae-r.2 for 123053821	tae-r.2 for 123127784	bdi-r.1 for 100824516	bdi-r.1 for 100826929	osa-u.5 for 4329969	osa-u.5 for 4336323	zma-u.5 for 100280910	zma-u.5 for 100273563	sbi-r.1 for 8075897	sbi-r.1 for 110434682	ath-u.5 for AT1G15740	gma-u.5 for 100800666	gma-u.5 for 100795219	gma-u.5 for 100790802	sly-u.5 for 101260523	sly-u.5 for 101256686	bra-r.6 for 103872360	vvi-u.5 for 100265253	vvi-u.5 for 100243795	ppo-u.5 for 7474690	mtr-u.5 for 11418699	mtr-u.5 for 11445492	ghi-r.1 for 107897286	ghi-r.1 for 107914145	ghi-r.1 for 107917721	bna-r.1 for 106346642	bna-r.1 for 106396441	sot-r.1 for 102583019	sot-r.1 for 102581359	cit-r.1 for 102630409	cit-r.1 for 102609559	nta-r.1 for 107776078	nta-r.1 for 107779812	nta-r.1 for 107812483	cre-r.1 for CHLRE_11g467559v5	cre-r.1 for CHLRE_03g188100v5

Ortholog

Ortholog ID: 3514

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

putative adenylate cyclase regulatory protein

F-box/LRR-repeat protein 14-like

putative adenylate cyclase regulatory protein

F-box/LRR-repeat protein 14

leucine-rich repeat-containing G-protein coupled receptor 4

uncharacterized LOC4329969

uncharacterized LOC4336323

regulatory subunit

uncharacterized LOC100273563

F-box/LRR-repeat protein 14

F-box/LRR-repeat protein 14-like

Leucine-rich repeat family protein

dynein regulatory complex subunit 6

F-box/LRR-repeat protein 14

dynein regulatory complex subunit 6

uncharacterized LOC101260523

uncharacterized LOC101256686

F-box/LRR-repeat protein 14

uncharacterized LOC100265253

uncharacterized LOC100243795

uncharacterized LOC7474690

F-box/LRR-repeat protein 14

F-box/LRR-repeat protein 3

F-box/LRR-repeat protein 14

leucine-rich repeat-containing G-protein coupled receptor 4

F-box/LRR-repeat protein 14

F-box/LRR-repeat protein 14-like

F-box/LRR-repeat protein 14

uncharacterized LOC102630409

uncharacterized LOC102609559

uncharacterized LOC107776078

uncharacterized LOC107812483

uncharacterized LOC107832683

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae00330	Arginine and proline metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	3
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00280	Valine, leucine and isoleucine degradation	3
vvi00410	beta-Alanine metabolism	2
vvi00640	Propanoate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo04120	Ubiquitin mediated proteolysis	2
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00592	alpha-Linolenic acid metabolism	2
ghi00640	Propanoate metabolism	2
ghi01040	Biosynthesis of unsaturated fatty acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	5
ghi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	6
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03440	Homologous recombination	2
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

123427173

123402701

123045954

123144813

123137456

100824516

100826929

4329969

4336323

100280910

100273563

8075897

110434682

838143

100795219

100790802

100779410

101260523

101256686

103872360

100265253

100243795

7474690

11418699

11445492

107914145

107917721

107912596

106346642

106396441

102583019

102581359

102630409

102609559

107776078

107812483

107832683

5726925

5717481

The preparation time of this page was 0.1 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	2	2	1	3	2	1	2	1	2	3	2	2	2	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123427173 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123427173 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**