ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123427343	casein kinase 1-like protein HD16
hvu-r.1	123443119	casein kinase 1-like protein HD16
hvu-r.1	123444386	casein kinase 1-like protein HD16
hvu-r.1	123444530	casein kinase 1-like protein HD16
tae-r.2	123070941	casein kinase 1-like protein HD16
tae-r.2	123188616	casein kinase 1-like protein HD16
tae-r.2	123180803	casein kinase 1-like protein HD16
bdi-r.1	100821235	casein kinase 1-like protein HD16
bdi-r.1	100839189	casein kinase 1-like protein HD16
bdi-r.1	100825718	casein kinase 1-like protein HD16
osa-u.5	4338058	casein kinase 1-like protein HD16
osa-u.5	4324710	casein kinase 1-like protein HD16
osa-u.5	4326170	casein kinase 1-like protein HD16
zma-u.5	100285738	uncharacterized LOC100285738
zma-u.5	100286103	ATP binding protein
zma-u.5	103634938	casein kinase 1-like protein HD16
sbi-r.1	8080525	casein kinase 1-like protein HD16
sbi-r.1	8055724	casein kinase 1-like protein HD16
ath-u.5	AT5G18190	Protein kinase family protein
ath-u.5	AT2G25760	Protein kinase family protein
ath-u.5	AT3G03940	Protein kinase family protein
gma-u.5	100800869	casein kinase 1-like protein HD16
gma-u.5	100801967	casein kinase 1-like protein HD16
gma-u.5	100803733	casein kinase 1-like protein HD16
sly-u.5	101244359	protein kinase family protein
sly-u.5	101245026	casein kinase 1-like protein HD16
sly-u.5	101265359	casein kinase 1-like protein HD16
bra-r.6	103851164	casein kinase 1-like protein HD16
bra-r.6	103856881	casein kinase 1-like protein HD16
bra-r.6	103845859	casein kinase 1-like protein HD16
vvi-u.5	100254265	casein kinase 1-like protein HD16
vvi-u.5	104877804	casein kinase 1-like protein HD16
vvi-u.5	100267624	uncharacterized LOC100267624
ppo-u.5	7455746	casein kinase 1-like protein HD16
ppo-u.5	7491038	casein kinase 1-like protein HD16
ppo-u.5	7462292	casein kinase 1-like protein HD16
mtr-u.5	11417788	casein kinase 1-like protein HD16
mtr-u.5	25490136	casein kinase 1-like protein HD16
mtr-u.5	11419592	casein kinase 1-like protein HD16
ghi-r.1	107933855	casein kinase 1-like protein HD16
ghi-r.1	107916400	casein kinase 1-like protein HD16
ghi-r.1	107913878	casein kinase 1-like protein HD16
bna-r.1	106390464	casein kinase 1-like protein HD16
bna-r.1	125575196	casein kinase 1-like protein HD16
bna-r.1	106351035	casein kinase 1-like protein HD16
sot-r.1	102603072	uncharacterized LOC102603072
sot-r.1	102581327	casein kinase I isoform gamma-3-like
sot-r.1	102583902	uncharacterized LOC102583902
cit-r.1	102627154	casein kinase 1-like protein HD16
cit-r.1	102609857	hypothetical protein
cit-r.1	102607770	casein kinase 1-like protein HD16
nta-r.1	107813347	casein kinase 1-like protein HD16
nta-r.1	107783398	casein kinase 1-like protein HD16
nta-r.1	107824782	casein kinase 1-like protein HD16
cre-r.1	CHLRE_16g666200v5	uncharacterized protein
cre-r.1	CHLRE_06g281100v5	uncharacterized protein

Top 50 coexpressed genes to 123427343 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123427343 (hvu-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

casein kinase 1-like protein HD16

KEGG

GO BP

GO:0006897 [list] [network] endocytosis	(64 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(78 genes)	IEA
GO:0007165 [list] [network] signal transduction	(737 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(3241 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5514 genes)	IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(489 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2546 genes)	IEA

Protein

XP_044967299.1 [sequence] [blastp]
XP_044967307.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, cysk_nucl 1, plas 1, vacu 1, mito 1, extr 1, golg_plas 1, E.R._vacu 1, E.R._plas 1, cyto_plas 1	(predict for XP_044967299.1)
chlo 5, mito 2, nucl 1, cyto_mito 1, cysk_nucl 1, mito_plas 1	(predict for XP_044967307.1)

Subcellular
localization
TargetP

other 9	(predict for XP_044967299.1)
other 4, mito 4	(predict for XP_044967307.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123427343	hvu-r.1 for 123443119	hvu-r.1 for 123444386	hvu-r.1 for 123444530	tae-r.2 for 123070941	tae-r.2 for 123188616	tae-r.2 for 123180803	bdi-r.1 for 100821235	bdi-r.1 for 100839189	bdi-r.1 for 100825718	osa-u.5 for 4338058	osa-u.5 for 4324710	osa-u.5 for 4326170	zma-u.5 for 100285738	zma-u.5 for 100286103	zma-u.5 for 103634938	sbi-r.1 for 8080525	sbi-r.1 for 8055724	ath-u.5 for AT5G18190	ath-u.5 for AT2G25760	ath-u.5 for AT3G03940	gma-u.5 for 100800869	gma-u.5 for 100801967	gma-u.5 for 100803733	sly-u.5 for 101244359	sly-u.5 for 101245026	sly-u.5 for 101265359	bra-r.6 for 103851164	bra-r.6 for 103856881	bra-r.6 for 103845859	vvi-u.5 for 100254265	vvi-u.5 for 104877804	vvi-u.5 for 100267624	ppo-u.5 for 7455746	ppo-u.5 for 7491038	ppo-u.5 for 7462292	mtr-u.5 for 11417788	mtr-u.5 for 25490136	mtr-u.5 for 11419592	ghi-r.1 for 107933855	ghi-r.1 for 107916400	ghi-r.1 for 107913878	bna-r.1 for 106390464	bna-r.1 for 125575196	bna-r.1 for 106351035	sot-r.1 for 102603072	sot-r.1 for 102581327	sot-r.1 for 102583902	cit-r.1 for 102627154	cit-r.1 for 102609857	cit-r.1 for 102607770	nta-r.1 for 107813347	nta-r.1 for 107783398	nta-r.1 for 107824782	cre-r.1 for CHLRE_16g666200v5	cre-r.1 for CHLRE_06g281100v5

Please wait a moment.

Ortholog

Ortholog ID: 309

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

casein kinase 1-like protein HD16

uncharacterized LOC100285738

casein kinase 1-like protein HD16

casein kinase I

casein kinase 1-like protein HD16

Protein kinase family protein

casein kinase 1-like protein HD16

uncharacterized LOC102603072

casein kinase I isoform gamma-3-like

uncharacterized LOC102583902

casein kinase 1-like protein HD16

hypothetical protein

casein kinase 1-like protein HD16

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3
tae00561	Glycerolipid metabolism	2
tae00564	Glycerophospholipid metabolism	2
tae04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae04146	Peroxisome	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	2
sly03272	Virion - Hepatitis viruses	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi03250	Viral life cycle - HIV-1	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00230	Purine metabolism	2
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03083	Polycomb repressive complex	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	3
mtr00500	Starch and sucrose metabolism	2
mtr04070	Phosphatidylinositol signaling system	2
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi03013	Nucleocytoplasmic transport	2
ghi03040	Spliceosome	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3
sot04382	Cornified envelope formation	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3
cre03040	Spliceosome	3
cre03020	RNA polymerase	2
cre03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

123427343

123444530

123452693

123180803

123115563

123069191

100839189

100825718

100836999

4324710

4326170

4334396

100285738

103648356

103649605

8075560

110433807

110432526

819551

820572

100800869

100819969

101245026

101267788

103859531

103828226

103855200

100254265

100253221

100263956

7455746

7462292

7478417

11422003

11432252

11438607

107897345

107893255

107962165

125575196

106432518

106433055

102603072

102581327

102583902

102627154

102609857

102607770

107785522

107770915

107763246

5726979

5720923

The preparation time of this page was 0.6 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	2	3	3	3	3	3	3	3	3	3	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123427343 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123427343 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**