ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123427823	uncharacterized LOC123427823
hvu-r.1	123428508	30S ribosomal protein S11, chloroplastic-like
hvu-r.1	123445554	probable ribosomal protein S11, mitochondrial
tae-r.2	123047534	uncharacterized LOC123047534
tae-r.2	123054572	uncharacterized LOC123054572
tae-r.2	123055341	uncharacterized LOC123055341
osa-u.5	4332994	uncharacterized LOC4332994
osa-u.5	4325316	small ribosomal subunit protein uS11m
zma-u.5	100282151	ribosomal protein S11 containing protein
sbi-r.1	8061121	probable ribosomal protein S11, mitochondrial
ath-u.5	NFD3	Ribosomal L18p/L5e family protein
gma-u.5	100799648	probable ribosomal protein S11, mitochondrial
gma-u.5	100783046	probable ribosomal protein S11, mitochondrial
sly-u.5	101267044	small ribosomal subunit protein uS11m
bra-r.6	103840218	probable ribosomal protein S11, mitochondrial
vvi-u.5	100256569	small ribosomal subunit protein uS11m
ppo-u.5	18100881	uncharacterized LOC18100881
mtr-u.5	11433573	probable ribosomal protein S11, mitochondrial
mtr-u.5	25495138	probable ribosomal protein S11, mitochondrial
ghi-r.1	107899075	probable ribosomal protein S11, mitochondrial
ghi-r.1	107894107	probable ribosomal protein S11, mitochondrial
bna-r.1	106355386	probable ribosomal protein S11, mitochondrial
bna-r.1	111212593	probable ribosomal protein S11, mitochondrial
bna-r.1	106367161	probable ribosomal protein S11, mitochondrial
sot-r.1	102605043	probable ribosomal protein S11, mitochondrial
cit-r.1	102621035	hypothetical protein
nta-r.1	107829803	small ribosomal subunit protein uS11m
nta-r.1	107767274	small ribosomal subunit protein uS11m-like
nta-r.1	107821542	small ribosomal subunit protein uS11m

Annotation

functional annotation

KEGG

hvg03010 [list] [network] Ribosome (15126 genes)

GO BP

GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	(40 genes)	IEA
GO:0000028 [list] [network] ribosomal small subunit assembly	(52 genes)	IEA
GO:0006412 [list] [network] translation	(594 genes)	IEA

GO CC

GO:0005763 [list] [network] mitochondrial small ribosomal subunit	(44 genes)	IEA
GO:0005840 [list] [network] ribosome	(449 genes)	IEA

GO MF

GO:0048027 [list] [network] mRNA 5'-UTR binding	(5 genes)	IEA
GO:0070181 [list] [network] small ribosomal subunit rRNA binding	(40 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(445 genes)	IEA

Protein

XP_044967893.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 3, chlo_mito 3

(predict for XP_044967893.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_044967893.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123427823	hvu-r.1 for 123428508	hvu-r.1 for 123445554	tae-r.2 for 123047534	tae-r.2 for 123054572	tae-r.2 for 123055341	osa-u.5 for 4332994	osa-u.5 for 4325316	zma-u.5 for 100282151	sbi-r.1 for 8061121	ath-u.5 for NFD3	gma-u.5 for 100799648	gma-u.5 for 100783046	sly-u.5 for 101267044	bra-r.6 for 103840218	vvi-u.5 for 100256569	ppo-u.5 for 18100881	mtr-u.5 for 11433573	mtr-u.5 for 25495138	ghi-r.1 for 107899075	ghi-r.1 for 107894107	bna-r.1 for 106355386	bna-r.1 for 111212593	bna-r.1 for 106367161	sot-r.1 for 102605043	cit-r.1 for 102621035	nta-r.1 for 107829803	nta-r.1 for 107767274	nta-r.1 for 107821542

Ortholog

Ortholog ID: 5903

Species

hvu

tae

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NFD3

Function^*

uncharacterized LOC123427823

30S ribosomal protein S11, chloroplastic-like